RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 ADD3Q9UEY8 706 aaKnown RBP12.22□□□□□ -0.45
HDAC8-215ENST00000444609 RALGAPA2Q2PPJ7 1873 aa12.22□□□□□ -0.45
HDAC8-215ENST00000444609 FSD2A1L4K1 749 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 ZIC2O95409 532 aaPredicted RBP12.21□□□□□ -0.45
HDAC8-215ENST00000444609 TXNP10599 105 aaKnown RBP12.21□□□□□ -0.45
HDAC8-215ENST00000444609 ALAS1P13196 640 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.45
HDAC8-215ENST00000444609 THPOP40225 353 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 ALDH5A1P51649 535 aaPredicted RBP12.21□□□□□ -0.45
HDAC8-215ENST00000444609 PDE4BQ07343 736 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 KCNC3Q14003 757 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 BTG3Q14201 252 aaPredicted RBP12.21□□□□□ -0.45
HDAC8-215ENST00000444609 DUSP6Q16828 381 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 MUM1L1Q5H9M0 696 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 C16orf86Q6ZW13 317 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 ZDHHC14Q8IZN3 488 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 KLHL23Q8NBE8 558 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 SCFD2Q8WU76 684 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 AFG1LQ8WV93 481 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 CDCA3Q99618 268 aaPredicted RBP12.21□□□□□ -0.45
HDAC8-215ENST00000444609 ERVK-5Q9HDB9 667 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.45
HDAC8-215ENST00000444609 NYAP2Q9P242 653 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 LIMD1Q9UGP4 676 aa12.21□□□□□ -0.45
HDAC8-215ENST00000444609 MMP3P08254 477 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 TGM1P22735 817 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 TECP42680 631 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 SHC2P98077 582 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 MTX1Q13505 466 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 C12orf60Q5U649 245 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 NSMFQ6X4W1 530 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 RPAP2Q8IXW5 612 aaPredicted RBP12.2□□□□□ -0.46
HDAC8-215ENST00000444609 BORCS6Q96GS4 357 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 APOL5Q9BWW9 433 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 ANTXR1Q9H6X2 564 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 NLRC5Q86WI3 1866 aa12.2□□□□□ -0.46
HDAC8-215ENST00000444609 SPEGQ15772 3267 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 CYP2D7A0A087X1C5 515 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 KINO60870 393 aaKnown RBP12.19□□□□□ -0.46
HDAC8-215ENST00000444609 HOXB8P17481 243 aaPredicted RBP12.19□□□□□ -0.46
HDAC8-215ENST00000444609 PMLP29590 882 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 PSEN2P49810 448 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 G3BP1Q13283 466 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDAC8-215ENST00000444609 HIC1Q14526 733 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 TNNI3KQ59H18 835 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 LRSAM1Q6UWE0 723 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 SERINC5Q86VE9 423 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 SIX5Q8N196 739 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 MICAL1Q8TDZ2 1067 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 APBB2Q92870 758 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 ALG1Q9BT22 464 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 POMKQ9H5K3 350 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 FPGT-TNNI3KV9GXZ4 949 aa12.19□□□□□ -0.46
HDAC8-215ENST00000444609 HAS3O00219 553 aa12.18□□□□□ -0.46
HDAC8-215ENST00000444609 DGKIO75912 1065 aa12.18□□□□□ -0.46
HDAC8-215ENST00000444609 ARIH2O95376 493 aa12.18□□□□□ -0.46
HDAC8-215ENST00000444609 SRGAP2BP0DMP2 458 aa12.18□□□□□ -0.46
HDAC8-215ENST00000444609 BAATQ14032 418 aaPredicted RBP12.18□□□□□ -0.46
HDAC8-215ENST00000444609 NECTIN4Q96NY8 510 aa12.18□□□□□ -0.46
HDAC8-215ENST00000444609 ASH1LQ9NR48 2969 aaKnown RBP12.18□□□□□ -0.46
HDAC8-215ENST00000444609 CLIP2Q9UDT6 1046 aa12.18□□□□□ -0.46
HDAC8-215ENST00000444609 CDH22Q9UJ99 828 aa12.18□□□□□ -0.46
HDAC8-215ENST00000444609 ZMIZ1Q9ULJ6 1067 aa12.18□□□□□ -0.46
HDAC8-215ENST00000444609 MRPL42Q9Y6G3 142 aaKnown RBP12.18□□□□□ -0.46
HDAC8-215ENST00000444609 MAST4O15021 2626 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 SLC30A4O14863 429 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 TBC1D8BQ0IIM8 1120 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 MFSD10Q14728 455 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 KIAA0753Q2KHM9 967 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 C1orf210Q8IVY1 113 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 LCORLQ8N3X6 602 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 SECISBP2LQ93073 1101 aaKnown RBP12.17□□□□□ -0.46
HDAC8-215ENST00000444609 MKL1Q969V6 931 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 KATNAL1Q9BW62 490 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 FBXL21Q9UKT6 434 aa12.17□□□□□ -0.46
HDAC8-215ENST00000444609 SALL2Q9Y467 1007 aaPredicted RBP12.17□□□□□ -0.46
HDAC8-215ENST00000444609 UNC79Q9P2D8 2635 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 MYO10Q9HD67 2058 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 TMEM232C9JQI7 657 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 BMP3P12645 472 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 EDNRBP24530 442 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 PDE4DQ08499 809 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 DGKDQ16760 1214 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 CCDC62Q6P9F0 684 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 TDRD5Q8NAT2 981 aaKnown RBP12.16□□□□□ -0.46
HDAC8-215ENST00000444609 RASGRP4Q8TDF6 673 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 MEIS3Q99687 375 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 ADAM7Q9H2U9 754 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 ATP8A2Q9NTI2 1148 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 USP18Q9UMW8 372 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 NAV1Q8NEY1 1877 aa12.16□□□□□ -0.46
HDAC8-215ENST00000444609 ZZEF1O43149 2961 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 STK25O00506 426 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 ENPP3O14638 875 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 PRKAB2O43741 272 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 PPFIA3O75145 1194 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 F2P00734 622 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 GH1P01241 217 aa12.15□□□□□ -0.46
HDAC8-215ENST00000444609 STAT2P52630 851 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms