RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 ARFGEF2Q9Y6D5 1785 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 STRCP1A6NGW2 1772 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
CALD1-210ENST00000443197 MCTP2Q6DN12 878 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 FAM151AQ8WW52 585 aa11.7□□□□□ -0.54
CALD1-210ENST00000443197 CD44P16070 742 aaKnown RBP11.69□□□□□ -0.54
CALD1-210ENST00000443197 MTMR2Q13614 643 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 UTP14CQ5TAP6 766 aaKnown RBP11.69□□□□□ -0.54
CALD1-210ENST00000443197 TOGARAM2Q6ZUX3 1019 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 GLG1Q92896 1179 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
CALD1-210ENST00000443197 CCSER1Q9C0I3 900 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 ARFGAP3Q9NP61 516 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 SPTLC3Q9NUV7 552 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 LARSQ9P2J5 1176 aaKnown RBP11.69□□□□□ -0.54
CALD1-210ENST00000443197 GMPSP49915 693 aaPredicted RBP11.69□□□□□ -0.54
CALD1-210ENST00000443197 HMGCS2P54868 508 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 AP3B2Q13367 1082 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 ASIC2Q16515 512 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 SFMBT2Q5VUG0 894 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 SEPT14Q6ZU15 432 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 FAM160B2Q86V87 743 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 RAD54LQ92698 747 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 NAA15Q9BXJ9 866 aaKnown RBP11.69□□□□□ -0.54
CALD1-210ENST00000443197 BUB1O43683 1085 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 TUBB4AP04350 444 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 ANKRD40Q6AI12 368 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 UNC13DQ70J99 1090 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 DPH6Q7L8W6 267 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 RMDN3Q96TC7 470 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 MPHOSPH6Q99547 160 aaKnown RBP11.69□□□□□ -0.54
CALD1-210ENST00000443197 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
CALD1-210ENST00000443197 EIF3JO75822 258 aaKnown RBP11.68□□□□□ -0.54
CALD1-210ENST00000443197 MYL1P05976 194 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 CTNNBL1Q8WYA6 563 aaPredicted RBP11.68□□□□□ -0.54
CALD1-210ENST00000443197 DYDC2Q96IM9 177 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 NDST4Q9H3R1 872 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 SUGCTQ9HAC7 445 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 ATRNO75882 1429 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 MYMKA6NI61 221 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 ANGEL2Q5VTE6 544 aaKnown RBP11.68□□□□□ -0.54
CALD1-210ENST00000443197 SFR1Q86XK3 245 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 CEP112Q8N8E3 955 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 PRPF38AQ8NAV1 312 aaKnown RBP11.68□□□□□ -0.54
CALD1-210ENST00000443197 FZD1Q9UP38 647 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 SUPT20HL1Q3ZLR7 823 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 RNF207Q6ZRF8 634 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 KRT26Q7Z3Y9 468 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 MB21D1Q8N884 522 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 SECISBP2LQ93073 1101 aaKnown RBP11.68□□□□□ -0.54
CALD1-210ENST00000443197 CCDC51Q96ER9 411 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 IFT74Q96LB3 600 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 AGBL1Q96MI9 1066 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 FNBP1Q96RU3 617 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 COASYQ13057 564 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 SLC35F6Q8N357 371 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 GDAP1L1Q96MZ0 367 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 IRX2Q9BZI1 471 aaPredicted RBP11.68□□□□□ -0.54
CALD1-210ENST00000443197 DEFB129Q9H1M3 183 aa11.68□□□□□ -0.54
CALD1-210ENST00000443197 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.68□□□□□ -0.54
CALD1-210ENST00000443197 KRT5P13647 590 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 GJC1P36383 396 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 PRPHP41219 470 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 SNRNP48Q6IEG0 339 aaKnown RBP11.67□□□□□ -0.54
CALD1-210ENST00000443197 POTEAQ6S8J7 498 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 WDR11Q9BZH6 1224 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 MFAP3LO75121 409 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 CCDC172P0C7W6 258 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 ABCB4P21439 1286 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 USP14P54578 494 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 MAN2A1Q16706 1144 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 GNPTABQ3T906 1256 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 NACC1Q96RE7 527 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 GBP3Q9H0R5 595 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 MLXIPQ9HAP2 919 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 GAKO14976 1311 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 IPO5O00410 1097 aaKnown RBP11.67□□□□□ -0.54
CALD1-210ENST00000443197 DLATP10515 647 aaKnown RBP11.67□□□□□ -0.54
CALD1-210ENST00000443197 FUT2Q10981 343 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 BMS1Q14692 1282 aaKnown RBP11.67□□□□□ -0.54
CALD1-210ENST00000443197 USP37Q86T82 979 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 ZKSCAN4Q969J2 545 aaPredicted RBP11.67□□□□□ -0.54
CALD1-210ENST00000443197 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 STK24Q9Y6E0 443 aa11.67□□□□□ -0.54
CALD1-210ENST00000443197 TTC26A0AVF1 554 aa11.66□□□□□ -0.54
CALD1-210ENST00000443197 HDLBPQ00341 1268 aaKnown RBP11.66□□□□□ -0.54
CALD1-210ENST00000443197 PPP1R18Q6NYC8 613 aa11.66□□□□□ -0.54
CALD1-210ENST00000443197 THAP9Q9H5L6 903 aa11.66□□□□□ -0.54
CALD1-210ENST00000443197 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
CALD1-210ENST00000443197 RIOX1Q9H6W3 641 aa11.66□□□□□ -0.54
CALD1-210ENST00000443197 VCPKMTQ9H867 229 aa11.66□□□□□ -0.54
CALD1-210ENST00000443197 RNF181Q9P0P0 153 aa11.66□□□□□ -0.54
CALD1-210ENST00000443197 TNFAIP3P21580 790 aa11.66□□□□□ -0.54
CALD1-210ENST00000443197 USP11P51784 963 aa11.66□□□□□ -0.54
CALD1-210ENST00000443197 CCZ1BP86790 482 aa11.66□□□□□ -0.54
CALD1-210ENST00000443197 CCZ1P86791 482 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms