RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CCDC138Q96M89 665 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 SERPINI1Q99574 410 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 TRIM56Q9BRZ2 755 aaKnown RBP11.17□□□□□ -0.62
LIN54-202ENST00000442461 MLXIPQ9HAP2 919 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 TTC26A0AVF1 554 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 LGALS16A8MUM7 142 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 PSMD14O00487 310 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 ZNF185O15231 689 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 CALUO43852 315 aaPredicted RBP11.17□□□□□ -0.62
LIN54-202ENST00000442461 PALMO75781 387 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 ESRRBO95718 433 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 AGTP01019 485 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 GFAPP14136 432 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 CYP7A1P22680 504 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 MARK3P27448 753 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 AARSP49588 968 aaKnown RBP eCLIP11.17□□□□□ -0.62
LIN54-202ENST00000442461 RPS6KA3P51812 740 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 CCNHP51946 323 aaPredicted RBP11.17□□□□□ -0.62
LIN54-202ENST00000442461 SKOR1P84550 965 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 RESP18Q5W5W9 173 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 NELFCDQ8IXH7 590 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 SRRM1Q8IYB3 904 aaKnown RBP11.17□□□□□ -0.62
LIN54-202ENST00000442461 MYOCDQ8IZQ8 938 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 AFAP1L2Q8N4X5 818 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 ARL10Q8N8L6 244 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 P2RX5Q93086 422 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 TRAIPQ9BWF2 469 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 C10orf88Q9H8K7 445 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 ZNF148Q9UQR1 794 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 NDUFB9Q9Y6M9 179 aa11.17□□□□□ -0.62
LIN54-202ENST00000442461 INAQ16352 499 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 RGS9BPQ6ZS82 235 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 EZH1Q92800 747 aaPredicted RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 PRMT1Q99873 361 aaKnown RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 PPARGC1AQ9UBK2 798 aaKnown RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 C2CD2Q9Y426 696 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 WASLO00401 505 aaPredicted RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 EEF1B2P24534 225 aaKnown RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 RABGAP1LQ5R372 815 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 DAB2IPQ5VWQ8 1189 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 OLFML1Q6UWY5 402 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 NT5C3AQ9H0P0 336 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 FOXP1Q9H334 677 aaPredicted RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 WDR91A4D1P6 747 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 RASA4BC9J798 803 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 RASA4O43374 803 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 SERPING1P05155 500 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 HSPD1P10809 573 aaKnown RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 XRCC5P13010 732 aaKnown RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 NR1H3Q13133 447 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 LIN9Q5TKA1 542 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 CRELD2Q6UXH1 353 aaPredicted RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 TMEM165Q9HC07 324 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 UBAP1Q9NZ09 502 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
LIN54-202ENST00000442461 ANAPC5Q9UJX4 755 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 MAGI2Q86UL8 1455 aa11.16□□□□□ -0.62
LIN54-202ENST00000442461 CFAP69A5D8W1 941 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 FGGP02679 453 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 PGM1P36871 562 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 MRPL12P52815 198 aaKnown RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 MDM2Q00987 491 aaPredicted RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 PPARAQ07869 468 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 PTGDRQ13258 359 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 ITIH4Q14624 930 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 WDR75Q8IWA0 830 aaKnown RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 NDEL1Q9GZM8 345 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 DDX47Q9H0S4 455 aaKnown RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 PARVBQ9HBI1 364 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 PNMA2Q9UL42 364 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 CCDC22O60826 627 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 ATP4AP20648 1035 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 TXKP42681 527 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 TNNI2P48788 182 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 CARSP49589 748 aaKnown RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 MRPS15P82914 257 aaKnown RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 BZW1Q7L1Q6 419 aaKnown RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 EPM2AIP1Q7L775 607 aaPredicted RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 PIGOQ8TEQ8 1089 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 CRNKL1Q9BZJ0 848 aaKnown RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 SLITRK6Q9H5Y7 841 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 IL1RAPL1Q9NZN1 696 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 TRPC5Q9UL62 973 aaPredicted RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 ATP11BQ9Y2G3 1177 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 COMMD10Q9Y6G5 202 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 A0A1B0GTH6 734 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 FOXO3O43524 673 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 YY1P25490 414 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 GSCP56915 257 aaPredicted RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 TRIM65Q6PJ69 517 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 CCDC89Q8N998 374 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 FAM133AQ8N9E0 248 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 MAML1Q92585 1016 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 ERP27Q96DN0 273 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 NR1H4Q96RI1 486 aaPredicted RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 DCLRE1BQ9H816 532 aa11.15□□□□□ -0.62
LIN54-202ENST00000442461 CNGB3Q9NQW8 809 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms