RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 NOGQ13253 232 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 SOGA3Q5TF21 947 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 RGMBQ6NW40 437 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 PI16Q6UXB8 463 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 METTL3Q86U44 580 aaKnown RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 MAP7D3Q8IWC1 876 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 CACNA2D3Q8IZS8 1091 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 TMEM57Q8N5G2 664 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 DEFB123Q8N688 67 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 NEK9Q8TD19 979 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 XAGE3Q8WTP9 111 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 PPP1R13LQ8WUF5 828 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 HNRNPLLQ8WVV9 542 aaKnown RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 CORO1BQ9BR76 489 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 SLC39A3Q9BRY0 314 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 SCAND2PQ9GZW5 306 aaPredicted RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 ABCF3Q9NUQ8 709 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 SUCLA2Q9P2R7 463 aaPredicted RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 SCOCQ9UIL1 159 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 ITGB1BP2Q9UKP3 347 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 CARD8Q9Y2G2 431 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 R3HDM2Q9Y2K5 976 aaKnown RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 L3MBTL1Q9Y468 752 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 DAAM1Q9Y4D1 1078 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 CHD2O14647 1828 aaKnown RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 CDHR2Q9BYE9 1310 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 SBNO1A3KN83 1393 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 PREX2Q70Z35 1606 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 A0A1B0GVL5 298 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 TRIM75PA6NK02 468 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 HMGB1P1B2RPK0 211 aaPredicted RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 H0YGN5 161 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 TBCAO75347 108 aaKnown RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 GFPT2O94808 682 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 ATP5JP18859 108 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 CYP2B6P20813 491 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 PPP2R1AP30153 589 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 USP46P62068 366 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 POSTNQ15063 836 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 DLGAP5Q15398 846 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 P3H1Q32P28 736 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 OLFML2BQ68BL8 750 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 KCTD16Q68DU8 428 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 Q6ZUG5 572 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 NCCRP1Q6ZVX7 275 aaPredicted RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 TBC1D1Q86TI0 1168 aaPredicted RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 ANKS4BQ8N8V4 417 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 RILPL2Q969X0 211 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 EVI5LQ96CN4 794 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 HIC2Q96JB3 615 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 NEUROD6Q96NK8 337 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 DEFB118Q96PH6 123 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 NDNQ99608 321 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 HINFPQ9BQA5 517 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 LBHD1Q9BQE6 289 aaPredicted RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 FUCA2Q9BTY2 467 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 UBE2OQ9C0C9 1292 aaKnown RBP3.05□□□□□ -1.92
LIG4-203ENST00000442234 ZWILCHQ9H900 591 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 PFDN4Q9NQP4 134 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 AASDHPPTQ9NRN7 309 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 TMOD2Q9NZR1 351 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 RASAL2Q9UJF2 1139 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 ZNF180Q9UJW8 692 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 NRAPQ86VF7 1730 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 ABCA12Q86UK0 2595 aa3.05□□□□□ -1.92
LIG4-203ENST00000442234 TARSL2A2RTX5 802 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 TRIM43BA6NCK2 446 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CCDC160A6NGH7 325 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 H3BQV1 296 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 POLRMTO00411 1230 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 ACTN4O43707 911 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 KDM1AO60341 852 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 PEX10O60683 326 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 TPPPO94811 219 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 KRT14P02533 472 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 HARSP12081 509 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 NFKBIAP25963 317 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 HPDP32754 393 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 FNTAP49354 379 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 BCAMP50895 628 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SF3A3Q12874 501 aaKnown RBP eCLIP3.04□□□□□ -1.92
LIG4-203ENST00000442234 SCARF1Q14162 830 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 FXNQ16595 210 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CFAP157Q5JU67 520 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ZNF569Q5MCW4 686 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 LARP1BQ659C4 914 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 LMBRD2Q68DH5 695 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 TMEM154Q6P9G4 183 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ATF7IPQ6VMQ6 1270 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SND1Q7KZF4 910 aaKnown RBP eCLIP3.04□□□□□ -1.92
LIG4-203ENST00000442234 C14orf80Q86SX3 495 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 LONP2Q86WA8 852 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ARFGAP2Q8N6H7 521 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ZBTB38Q8NAP3 1195 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 ZBTB8BQ8NAP8 495 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 TMEM87AQ8NBN3 555 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ZNF280CQ8ND82 737 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ZFAND2BQ8WV99 257 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SPIRE2Q8WWL2 714 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 LZICQ8WZA0 190 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms