RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 TRMT13Q9NUP7 481 aaKnown RBP20.93■□□□□ 0.94
SMPD4-210ENST00000441135 STXBP5LQ9Y2K9 1186 aa20.93■□□□□ 0.94
SMPD4-210ENST00000441135 V9GY48 417 aaPredicted RBP20.93■□□□□ 0.94
SMPD4-210ENST00000441135 SCN10AQ9Y5Y9 1956 aa20.92■□□□□ 0.94
SMPD4-210ENST00000441135 LAMA2P24043 3122 aaKnown RBP20.92■□□□□ 0.94
SMPD4-210ENST00000441135 PRPF3O43395 683 aaKnown RBP20.92■□□□□ 0.94
SMPD4-210ENST00000441135 DGKDQ16760 1214 aa20.92■□□□□ 0.94
SMPD4-210ENST00000441135 TMEM240Q5SV17 173 aa20.92■□□□□ 0.94
SMPD4-210ENST00000441135 C16orf59Q7L2K0 433 aa20.92■□□□□ 0.94
SMPD4-210ENST00000441135 IL31RAQ8NI17 732 aa20.92■□□□□ 0.94
SMPD4-210ENST00000441135 PPTC7Q8NI37 304 aa20.92■□□□□ 0.94
SMPD4-210ENST00000441135 GLT8D2Q9H1C3 349 aa20.92■□□□□ 0.94
SMPD4-210ENST00000441135 BARHL2Q9NY43 387 aa20.92■□□□□ 0.94
SMPD4-210ENST00000441135 TMEM265A0A087WTH1 108 aa20.91■□□□□ 0.94
SMPD4-210ENST00000441135 MEIS2O14770 477 aa20.91■□□□□ 0.94
SMPD4-210ENST00000441135 STAM2O75886 525 aa20.91■□□□□ 0.94
SMPD4-210ENST00000441135 RGS20O76081 388 aa20.91■□□□□ 0.94
SMPD4-210ENST00000441135 TGFB3P10600 412 aa20.91■□□□□ 0.94
SMPD4-210ENST00000441135 PFKFB3Q16875 520 aaPredicted RBP20.91■□□□□ 0.94
SMPD4-210ENST00000441135 UMODL1Q5DID0 1318 aa20.91■□□□□ 0.94
SMPD4-210ENST00000441135 WWC2Q6AWC2 1192 aa20.91■□□□□ 0.94
SMPD4-210ENST00000441135 HEATR3Q7Z4Q2 680 aa20.91■□□□□ 0.94
SMPD4-210ENST00000441135 DHX37Q8IY37 1157 aaKnown RBP20.91■□□□□ 0.94
SMPD4-210ENST00000441135 WNT8AQ9H1J5 351 aa20.91■□□□□ 0.94
SMPD4-210ENST00000441135 MTIF3Q9H2K0 278 aaKnown RBP20.91■□□□□ 0.94
SMPD4-210ENST00000441135 PSTPIP2Q9H939 334 aa20.91■□□□□ 0.94
SMPD4-210ENST00000441135 KIAA1217Q5T5P2 1943 aa20.9■□□□□ 0.94
SMPD4-210ENST00000441135 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.9■□□□□ 0.94
SMPD4-210ENST00000441135 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.9■□□□□ 0.94
SMPD4-210ENST00000441135 hCG_1642624A0A1W2PR95 340 aa20.9■□□□□ 0.94
SMPD4-210ENST00000441135 SCG2P13521 617 aa20.9■□□□□ 0.94
SMPD4-210ENST00000441135 RBM25P49756 843 aaKnown RBP20.9■□□□□ 0.94
SMPD4-210ENST00000441135 GNPTABQ3T906 1256 aa20.9■□□□□ 0.94
SMPD4-210ENST00000441135 RASIP1Q5U651 963 aa20.9■□□□□ 0.94
SMPD4-210ENST00000441135 XRRA1Q6P2D8 792 aa20.9■□□□□ 0.94
SMPD4-210ENST00000441135 CPLX2Q6PUV4 134 aaKnown RBP20.9■□□□□ 0.94
SMPD4-210ENST00000441135 SESTD1Q86VW0 696 aa20.9■□□□□ 0.94
SMPD4-210ENST00000441135 IL27Q8NEV9 243 aa20.9■□□□□ 0.94
SMPD4-210ENST00000441135 SMARCC2Q8TAQ2 1214 aa20.9■□□□□ 0.94
SMPD4-210ENST00000441135 KATNAL1Q9BW62 490 aa20.9■□□□□ 0.94
SMPD4-210ENST00000441135 ESYT2A0FGR8 921 aa20.89■□□□□ 0.93
SMPD4-210ENST00000441135 STXBP3O00186 592 aa20.89■□□□□ 0.93
SMPD4-210ENST00000441135 ACRP10323 421 aa20.89■□□□□ 0.93
SMPD4-210ENST00000441135 CYP2C9P11712 490 aa20.89■□□□□ 0.93
SMPD4-210ENST00000441135 NAPAP54920 295 aa20.89■□□□□ 0.93
SMPD4-210ENST00000441135 CCL23P55773 120 aa20.89■□□□□ 0.93
SMPD4-210ENST00000441135 ZNF365Q70YC5 407 aa20.89■□□□□ 0.93
SMPD4-210ENST00000441135 RPUSD2Q8IZ73 545 aaKnown RBP20.89■□□□□ 0.93
SMPD4-210ENST00000441135 FAM177A1Q8N128 213 aaPredicted RBP20.89■□□□□ 0.93
SMPD4-210ENST00000441135 CCDC12Q8WUD4 166 aaPredicted RBP20.89■□□□□ 0.93
SMPD4-210ENST00000441135 GPKOWQ92917 476 aaPredicted RBP eCLIP20.89■□□□□ 0.93
SMPD4-210ENST00000441135 RIC8AQ9NPQ8 531 aa20.89■□□□□ 0.93
SMPD4-210ENST00000441135 NOD1Q9Y239 953 aa20.89■□□□□ 0.93
SMPD4-210ENST00000441135 PITPNM1O00562 1244 aa20.88■□□□□ 0.93
SMPD4-210ENST00000441135 F2P00734 622 aa20.88■□□□□ 0.93
SMPD4-210ENST00000441135 PFKMP08237 780 aa20.88■□□□□ 0.93
SMPD4-210ENST00000441135 HOXD8P13378 290 aaPredicted RBP20.88■□□□□ 0.93
SMPD4-210ENST00000441135 UBA1P22314 1058 aaKnown RBP20.88■□□□□ 0.93
SMPD4-210ENST00000441135 AK2P54819 239 aa20.88■□□□□ 0.93
SMPD4-210ENST00000441135 CCT2P78371 535 aaKnown RBP20.88■□□□□ 0.93
SMPD4-210ENST00000441135 AKAP17AQ02040 695 aaKnown RBP20.88■□□□□ 0.93
SMPD4-210ENST00000441135 CELF3Q5SZQ8 465 aaKnown RBP20.88■□□□□ 0.93
SMPD4-210ENST00000441135 TYW1BQ6NUM6 668 aa20.88■□□□□ 0.93
SMPD4-210ENST00000441135 USP17L6PQ6QN14 398 aa20.88■□□□□ 0.93
SMPD4-210ENST00000441135 HERVK_113Q902F9 699 aa20.88■□□□□ 0.93
SMPD4-210ENST00000441135 KAT2BQ92831 832 aa20.88■□□□□ 0.93
SMPD4-210ENST00000441135 INPP4AQ96PE3 977 aaPredicted RBP20.88■□□□□ 0.93
SMPD4-210ENST00000441135 NCOA5Q9HCD5 579 aaKnown RBP20.88■□□□□ 0.93
SMPD4-210ENST00000441135 CPLX1O14810 134 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 PFKFB2O60825 505 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 GGPS1O95749 300 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 FGBP02675 491 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 CHMP4BP1P59074 171 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 BFSP2Q13515 415 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 PKN1Q16512 942 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 MYSM1Q5VVJ2 828 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 TRIM22Q8IYM9 498 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 FAM161BQ96MY7 647 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 SPATA33Q96N06 139 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 GUCD1Q96NT3 240 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 C22orf23Q9BZE7 217 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 UPF2Q9HAU5 1272 aaKnown RBP20.87■□□□□ 0.93
SMPD4-210ENST00000441135 GTF3C3Q9Y5Q9 886 aa20.87■□□□□ 0.93
SMPD4-210ENST00000441135 PPFIA4O75335 1185 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 CDKL5O76039 1030 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 FOSP01100 380 aaPredicted RBP20.86■□□□□ 0.93
SMPD4-210ENST00000441135 DNAJB2P25686 324 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 RFC2P35250 354 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 ADCY7P51828 1080 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 NEK4P51957 841 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 MRPS9P82933 396 aaKnown RBP20.86■□□□□ 0.93
SMPD4-210ENST00000441135 PTGISQ16647 500 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 PCNX4Q63HM2 1172 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 MCTP2Q6DN12 878 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 CCDC155Q8N6L0 562 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 RETREG2Q8NC44 543 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 PHKBQ93100 1093 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 ZMYND12Q9H0C1 365 aa20.86■□□□□ 0.93
SMPD4-210ENST00000441135 SLKQ9H2G2 1235 aaPredicted RBP20.86■□□□□ 0.93
SMPD4-210ENST00000441135 SEMA6BQ9H3T3 888 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms