RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SNRPB2P08579 225 aaKnown RBP4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 FBLN1P23142 703 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 PMLP29590 882 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 GJA9P57773 515 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 CACNB2Q08289 660 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 ACBD5Q5T8D3 534 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 ETV3LQ6ZN32 361 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 RIOX2Q8IUF8 465 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 DIO2Q92813 273 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 YTHDC1Q96MU7 727 aaKnown RBP4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 MTA3Q9BTC8 594 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 MCMBPQ9BTE3 642 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 EPB41L4AQ9HCS5 686 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 MARCH2Q9P0N8 246 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 TIMM13Q9Y5L4 95 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 TONSLQ96HA7 1378 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 NUP153P49790 1475 aaKnown RBP4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 AKNAQ7Z591 1439 aa4.72□□□□□ -1.65
HMGB3P11-201ENST00000440127 PLEKHD1A6NEE1 506 aa4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 SUSD5O60279 629 aa4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 THBDP07204 575 aa4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 KCNJ6P48051 423 aa4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 C6orf15Q6UXA7 325 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 LIPIQ6XZB0 460 aa4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 SAPCD2Q86UD0 394 aa4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 FNIP1Q8TF40 1166 aa4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 MRGPRX3Q96LB0 322 aa4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 CNOT11Q9UKZ1 510 aaKnown RBP4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 NUB1Q9Y5A7 615 aa4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 RAPGEF6Q8TEU7 1601 aa4.71□□□□□ -1.66
HMGB3P11-201ENST00000440127 CEP170Q5SW79 1584 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 ROCK1Q13464 1354 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 SH3D21A4FU49 640 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 C22orf46C9J442 243 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 CYP7B1O75881 506 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 NTRK1P04629 796 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 SCG5P05408 212 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 CELA3BP08861 270 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 HMGB1P09429 215 aaKnown RBP4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 LTBRP36941 435 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 HTRA3P83110 453 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 DPH6Q7L8W6 267 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 FAM124AQ86V42 546 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 ZNF227Q86WZ6 799 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 TTLL6Q8N841 843 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 ZNF513Q8N8E2 541 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 SLC43A3Q8NBI5 491 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 BTN2A2Q8WVV5 523 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 TRMT2BQ96GJ1 504 aaKnown RBP4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 TMEM169Q96HH4 297 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 WRNIP1Q96S55 665 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 MPHOSPH9Q99550 1183 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 XYLT2Q9H1B5 865 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 BTG4Q9NY30 223 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 CFDP1Q9UEE9 299 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 MRVI1Q9Y6F6 885 aa4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 TROQ12816 1431 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 PRG4Q92954 1404 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P11-201ENST00000440127 A0A0G2JLL6 359 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 H7BY64 318 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 FOXD2O60548 495 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 ITGAVP06756 1048 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 ATF2P15336 505 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 ECI1P42126 302 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 SLURP1P55000 103 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 TESK1Q15569 626 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 PPIL6Q8IXY8 311 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 Q8N1Y9 231 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 SMARCC2Q8TAQ2 1214 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 NPLOC4Q8TAT6 608 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 FEZF2Q8TBJ5 459 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 KCTD13Q8WZ19 329 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 GPRC5CQ9NQ84 441 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 PPP1R1BQ9UD71 204 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 ABCC5O15440 1437 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 DAPK1P53355 1430 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 ZNF644Q9H582 1327 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 PLB1Q6P1J6 1458 aa4.69□□□□□ -1.66
HMGB3P11-201ENST00000440127 OTOL1A6NHN0 477 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 FFAR3O14843 346 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 DGKIO75912 1065 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 FGRP09769 529 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 DNAJA1P31689 397 aaKnown RBP4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 SARSP49591 514 aaKnown RBP4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 NKX3-2P78367 333 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 MAP4K2Q12851 820 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 DDX10Q13206 875 aaKnown RBP4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 VMACQ2NL98 169 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 UBXN11Q5T124 520 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 BORAQ6PGQ7 559 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 MIB1Q86YT6 1006 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 FAM126BQ8IXS8 530 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 CARFQ8N187 725 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 PHOSPHO1Q8TCT1 267 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 PLEKHO2Q8TD55 490 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 FRS2Q8WU20 508 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 ZBTB8AQ96BR9 441 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 SGSM3Q96HU1 749 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 CHAMP1Q96JM3 812 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 EPB41L1Q9H4G0 881 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms