RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 TMEM60Q9H2L4 133 aa12.84□□□□□ -0.35
SMPD4-209ENST00000439886 CCNE1P24864 410 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 SLC9C1Q4G0N8 1177 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 TRIM68Q6AZZ1 485 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 TMX4Q9H1E5 349 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-209ENST00000439886 FBXL5Q9UKA1 691 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 STX8Q9UNK0 236 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 RGPD8O14715 1765 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-209ENST00000439886 CCNT1O60563 726 aaKnown RBP12.83□□□□□ -0.36
SMPD4-209ENST00000439886 DHX9Q08211 1270 aaKnown RBP12.83□□□□□ -0.36
SMPD4-209ENST00000439886 HLFQ16534 295 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 PREPLQ4J6C6 727 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-209ENST00000439886 BLIDQ8IZY5 108 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 SRBD1Q8N5C6 995 aaKnown RBP12.83□□□□□ -0.36
SMPD4-209ENST00000439886 ELAC2Q9BQ52 826 aaKnown RBP12.83□□□□□ -0.36
SMPD4-209ENST00000439886 MCM8Q9UJA3 840 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 PRPF3O43395 683 aaKnown RBP12.83□□□□□ -0.36
SMPD4-209ENST00000439886 GOLGA8HP0CJ92 632 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 SCTRP47872 440 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.36
SMPD4-209ENST00000439886 RUFY4Q6ZNE9 571 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 TSHZ1Q6ZSZ6 1077 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 MAEAQ7L5Y9 396 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 ANKS4BQ8N8V4 417 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 ZNF507Q8TCN5 953 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 KCNV2Q8TDN2 545 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 STAMBPL1Q96FJ0 436 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 MAF1Q9H063 256 aa12.83□□□□□ -0.36
SMPD4-209ENST00000439886 KRIT1O00522 736 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 DAPK3O43293 454 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 RAD21O60216 631 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 UPP2O95045 317 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 KLHL30Q0D2K2 578 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 LLGL1Q15334 1064 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 TCERG1LQ5VWI1 586 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 DAAM2Q86T65 1068 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 MARCH10Q8NA82 808 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-209ENST00000439886 LPIN2Q92539 896 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 SPAG5Q96R06 1193 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 LSM14BQ9BX40 385 aaKnown RBP12.82□□□□□ -0.36
SMPD4-209ENST00000439886 HSD17B3P37058 310 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 SFMBT2Q5VUG0 894 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 TTI2Q6NXR4 508 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 CCDC25Q86WR0 208 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 FAM133AQ8N9E0 248 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 NSMCE1Q8WV22 266 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 RAPGEF5Q92565 580 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 LRRC45Q96CN5 670 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 DUSP9Q99956 384 aaKnown RBP12.82□□□□□ -0.36
SMPD4-209ENST00000439886 OSBPL7Q9BZF2 842 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 YIPF3Q9GZM5 350 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 ACTR5Q9H9F9 607 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-209ENST00000439886 LEMD3Q9Y2U8 911 aa12.82□□□□□ -0.36
SMPD4-209ENST00000439886 FECHP22830 423 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 KLRC1P26715 233 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 SLC8A1P32418 973 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 LONP1P36776 959 aaKnown RBP12.81□□□□□ -0.36
SMPD4-209ENST00000439886 GRIK3Q13003 919 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 TBC1D25Q3MII6 688 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 VWA3BQ502W6 1294 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 KLHDC7AQ5VTJ3 777 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 IQCKQ8N0W5 287 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 RETREG2Q8NC44 543 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 CALML4Q96GE6 196 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 PACSIN1Q9BY11 444 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 MLXIPLQ9NP71 852 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 AMACRQ9UHK6 382 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 PIK3C2AO00443 1686 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 MYH13Q9UKX3 1938 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 DCDC2CA8MYV0 355 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 KRT18P05783 430 aaKnown RBP12.81□□□□□ -0.36
SMPD4-209ENST00000439886 CTSWP56202 376 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 EVX2Q03828 476 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 ADCY1Q08828 1119 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 CCDC50Q8IVM0 306 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 SAMD15Q9P1V8 674 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 NRXN3Q9Y4C0 1643 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 PECAM1P16284 738 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-209ENST00000439886 PPP2R2AP63151 447 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 ZBTB38Q8NAP3 1195 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-209ENST00000439886 CCDC197Q8NCU1 140 aa12.81□□□□□ -0.36
SMPD4-209ENST00000439886 DHTKD1Q96HY7 919 aaPredicted RBP12.81□□□□□ -0.36
SMPD4-209ENST00000439886 CELF4Q9BZC1 486 aaKnown RBP12.81□□□□□ -0.36
SMPD4-209ENST00000439886 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-209ENST00000439886 MEA1Q16626 185 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 DBN1Q16643 649 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 ANKRD20A8PQ5CZ79 823 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 WHAMMQ8TF30 809 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 CAVIN3Q969G5 261 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 TSG101Q99816 390 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 UBA5Q9GZZ9 404 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 NOD2Q9HC29 1040 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 PNMA2Q9UL42 364 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 DIP2AQ14689 1571 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 KRT13P13646 458 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 GNAT2P19087 354 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 TPP2P29144 1249 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms