RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 TADA2BQ86TJ2 420 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 LRRN4CLQ8ND94 238 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 RBM17Q96I25 401 aaKnown RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 CNOT6LQ96LI5 555 aaKnown RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 SPOCK3Q9BQ16 436 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 TRIM31Q9BZY9 425 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 TBC1D7Q9P0N9 293 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 PALLDQ8WX93 1383 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 SOS2Q07890 1332 aaPredicted RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 ATP6V1G1O75348 118 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 KRT71Q3SY84 523 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 RABL6Q3YEC7 729 aaPredicted RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 PHLDB3Q6NSJ2 640 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 VPS52Q8N1B4 723 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 SLC17A8Q8NDX2 589 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 SPDYE1Q8NFV5 336 aaPredicted RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 PIH1D3Q9NQM4 214 aaKnown RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 ATP8A2Q9NTI2 1148 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 SPATA7Q9P0W8 599 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 MROH7-TTC4A0A0A0MT08 1334 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 UBN2Q6ZU65 1347 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 RICTORQ6R327 1708 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 I3L4J1 428 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 EVI5O60447 810 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 HIBADHP31937 336 aaKnown RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 CXCR5P32302 372 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 MCAMP43121 646 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 BCAMP50895 628 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 DCAF17Q5H9S7 520 aaPredicted RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 VSIG1Q86XK7 387 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 FNBP4Q8N3X1 1017 aaPredicted RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 MIPOL1Q8TD10 442 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 RSPH1Q8WYR4 309 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 ATP2A3Q93084 1043 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 MCUR1Q96AQ8 359 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 STRBPQ96SI9 672 aaKnown RBP6.94□□□□□ -1.3
BDNF-211ENST00000439476 GABBR1Q9UBS5 961 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 N6AMT1Q9Y5N5 214 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 ANKARQ7Z5J8 1434 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 ARHGEF35A5YM69 484 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 BUB1BO60566 1050 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 KCNA2P16389 499 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 CTNNA1P35221 906 aaKnown RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 GGCXP38435 758 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 ZBED6P86452 979 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 KBTBD12Q3ZCT8 623 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 PEX26Q7Z412 305 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 SPATA21Q7Z572 469 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 CCDC25Q86WR0 208 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 PARP9Q8IXQ6 854 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 CCDC170Q8IYT3 715 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 KIRREL3Q8IZU9 778 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 SMC1BQ8NDV3 1235 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 SPDL1Q96EA4 605 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 KAZALD1Q96I82 304 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 FUT8Q9BYC5 575 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 NHEJ1Q9H9Q4 299 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 STK36Q9NRP7 1315 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 A0A1B0GTH6 734 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 CCDC160A6NGH7 325 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 CASQ2O14958 399 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 TROVE2P10155 538 aaKnown RBP eCLIP6.93□□□□□ -1.3
BDNF-211ENST00000439476 PCK1P35558 622 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 TFAP4Q01664 338 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 RNASELQ05823 741 aaKnown RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 DMPKQ09013 629 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 SF3A3Q12874 501 aaKnown RBP eCLIP6.93□□□□□ -1.3
BDNF-211ENST00000439476 MPP3Q13368 585 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 TTLL12Q14166 644 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 DENND2CQ68D51 928 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 RAD9BQ6WBX8 426 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 SDCCAG8Q86SQ7 713 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 PNMA8AQ86V59 439 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 MB21D1Q8N884 522 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 OXER1Q8TDS5 423 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 SNX29Q8TEQ0 813 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 TACO1Q9BSH4 297 aaKnown RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 SLC39A2Q9NP94 309 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 PSD3Q9NYI0 1048 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 AMFRQ9UKV5 643 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 GDAQ9Y2T3 454 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 KCNK3O14649 394 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 LUC7L3O95232 432 aaKnown RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 ZNF24P17028 368 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 USP14P54578 494 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 MRPS25P82663 173 aaKnown RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 RASSF7Q02833 373 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 STRN3Q13033 797 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 CRYMQ14894 314 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 NR1I3Q14994 352 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 CDC37Q16543 378 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 ATG9AQ7Z3C6 839 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 EZH1Q92800 747 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 GPKOWQ92917 476 aaPredicted RBP eCLIP6.93□□□□□ -1.3
BDNF-211ENST00000439476 DHTKD1Q96HY7 919 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 RMDN2Q96LZ7 410 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 LY9Q9HBG7 655 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 EPB41L5Q9HCM4 733 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 KLHL42Q9P2K6 505 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms