RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 ZNF652Q9Y2D9 606 aa6.64□□□□□ -1.35
UPP2-IT1-201ENST00000439185 PCDHA2Q9Y5H9 948 aa6.64□□□□□ -1.35
UPP2-IT1-201ENST00000439185 MRVI1Q9Y6F6 885 aa6.64□□□□□ -1.35
UPP2-IT1-201ENST00000439185 C1QTNF3-AMACRE9PGA6 284 aa6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 ZNF28P17035 718 aa6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 ATF4P18848 351 aaPredicted RBP6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 IL13P35225 146 aa6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 CHRNA2Q15822 529 aa6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 ACBD5Q5T8D3 534 aaPredicted RBP6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 LARP1BQ659C4 914 aaKnown RBP6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 ARRDC4Q8NCT1 418 aa6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 TOE1Q96GM8 510 aaKnown RBP6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 CCDC140Q96MF4 163 aa6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 ZSWIM3Q96MP5 696 aa6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 KIAA1522Q9P206 1035 aaPredicted RBP6.63□□□□□ -1.35
UPP2-IT1-201ENST00000439185 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 B2RBV5 119 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 H7BY64 318 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 AKAP8O43823 692 aaKnown RBP6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 B4GALT3O60512 393 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 CPP00450 1065 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 LCP1P13796 627 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 LTBRP36941 435 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 LSAMPQ13449 338 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 STEAP3Q658P3 488 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 PPIL6Q8IXY8 311 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 L2HGDHQ9H9P8 463 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 CLDND1Q9NY35 253 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 ACTR10Q9NZ32 417 aa6.62□□□□□ -1.35
UPP2-IT1-201ENST00000439185 TCRBV5S2A0A599 114 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 LAMTOR5O43504 91 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 SUSD5O60279 629 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 TADA3O75528 432 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 DDAH1O94760 285 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 MLLT6P55198 1093 aaPredicted RBP6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 SURF1Q15526 300 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 TESK1Q15569 626 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 DENND5AQ6IQ26 1287 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 DVL3Q92997 716 aaPredicted RBP6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 CLIC6Q96NY7 704 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 TMEM168Q9H0V1 697 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 DTLQ9NZJ0 730 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 PPP4R1LQ9P1A2 415 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 CROTQ9UKG9 612 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 PCDHB4Q9Y5E5 795 aa6.61□□□□□ -1.35
UPP2-IT1-201ENST00000439185 LRG1P02750 347 aa6.6□□□□□ -1.35
UPP2-IT1-201ENST00000439185 TNNI3KQ59H18 835 aa6.6□□□□□ -1.35
UPP2-IT1-201ENST00000439185 TEPPQ6URK8 271 aa6.6□□□□□ -1.35
UPP2-IT1-201ENST00000439185 PLEKHH3Q7Z736 793 aa6.6□□□□□ -1.35
UPP2-IT1-201ENST00000439185 TMEM145Q8NBT3 493 aa6.6□□□□□ -1.35
UPP2-IT1-201ENST00000439185 YTHDC1Q96MU7 727 aaKnown RBP6.6□□□□□ -1.35
UPP2-IT1-201ENST00000439185 NPEPPSL1A6NEC2 478 aa6.59□□□□□ -1.35
UPP2-IT1-201ENST00000439185 DGKIO75912 1065 aa6.59□□□□□ -1.35
UPP2-IT1-201ENST00000439185 FSHBP01225 129 aa6.59□□□□□ -1.35
UPP2-IT1-201ENST00000439185 SSBP05455 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
UPP2-IT1-201ENST00000439185 GFRA1P56159 465 aa6.59□□□□□ -1.35
UPP2-IT1-201ENST00000439185 EMC4Q5J8M3 183 aa6.59□□□□□ -1.35
UPP2-IT1-201ENST00000439185 MICAL1Q8TDZ2 1067 aa6.59□□□□□ -1.35
UPP2-IT1-201ENST00000439185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.59□□□□□ -1.35
UPP2-IT1-201ENST00000439185 MBD6Q96DN6 1003 aa6.59□□□□□ -1.35
UPP2-IT1-201ENST00000439185 CAPN10Q9HC96 672 aa6.59□□□□□ -1.35
UPP2-IT1-201ENST00000439185 UNCXA6NJT0 531 aa6.58□□□□□ -1.36
UPP2-IT1-201ENST00000439185 CYP7B1O75881 506 aa6.58□□□□□ -1.36
UPP2-IT1-201ENST00000439185 ICAM4Q14773 271 aa6.58□□□□□ -1.36
UPP2-IT1-201ENST00000439185 MRM1Q6IN84 353 aaKnown RBP6.58□□□□□ -1.36
UPP2-IT1-201ENST00000439185 SLC16A11Q8NCK7 471 aa6.58□□□□□ -1.36
UPP2-IT1-201ENST00000439185 SH3RF3Q8TEJ3 882 aaPredicted RBP6.58□□□□□ -1.36
UPP2-IT1-201ENST00000439185 KISS1RQ969F8 398 aaPredicted RBP6.58□□□□□ -1.36
UPP2-IT1-201ENST00000439185 EPB41L1Q9H4G0 881 aa6.58□□□□□ -1.36
UPP2-IT1-201ENST00000439185 MYOTQ9UBF9 498 aa6.58□□□□□ -1.36
UPP2-IT1-201ENST00000439185 WASF3Q9UPY6 502 aa6.58□□□□□ -1.36
UPP2-IT1-201ENST00000439185 ETFBP38117 255 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 PPP2CBP62714 309 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 PPP2CAP67775 309 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 FXNQ16595 210 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 TMC5Q6UXY8 1006 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 SPRED1Q7Z699 444 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 VPS37DQ86XT2 251 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 KBTBD2Q8IY47 623 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 IGDCC4Q8TDY8 1250 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 ZCCHC14Q8WYQ9 949 aaKnown RBP6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 C1orf159Q96HA4 380 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 TMEM209Q96SK2 561 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 SMOC1Q9H4F8 434 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 PRKAG3Q9UGI9 489 aa6.57□□□□□ -1.36
UPP2-IT1-201ENST00000439185 B4GALT4O60513 344 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 GRIA2P42262 883 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 CDSNQ15517 529 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 SLC35F1Q5T1Q4 408 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 PKN3Q6P5Z2 889 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 TRMT10BQ6PF06 316 aaKnown RBP6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 JAM3Q9BX67 310 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 JADE2Q9NQC1 790 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 RBPJLQ9UBG7 517 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 FTSJ1Q9UET6 329 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 SRRDQ9UH36 339 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 ZDHHC9Q9Y397 364 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 TSC22D4Q9Y3Q8 395 aa6.56□□□□□ -1.36
UPP2-IT1-201ENST00000439185 NPFFR2Q9Y5X5 522 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms