RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 GSTA1P08263 222 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 GSTA2P09210 222 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 JAK3P52333 1124 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 ZNF449Q6P9G9 518 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 HAUS8Q9BT25 410 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 MRPL47Q9HD33 250 aaKnown RBP17.24■□□□□ 0.35
PTPN13-204ENST00000436978 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.24■□□□□ 0.35
PTPN13-204ENST00000436978 INO80B-WBP1J3KQ70 363 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 CEP170P1Q96L14 293 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 INO80BQ9C086 356 aaPredicted RBP17.24■□□□□ 0.35
PTPN13-204ENST00000436978 GCNT4Q9P109 453 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 CIAPIN1Q6FI81 312 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 GCNAQ96QF7 691 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 TMEM63CQ9P1W3 806 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 HEXIM1O94992 359 aaKnown RBP17.24■□□□□ 0.35
PTPN13-204ENST00000436978 ANXA13P27216 316 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 APBA1Q02410 837 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 MAN2A1Q16706 1144 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 KAZNQ674X7 775 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 TMEM179Q6ZVK1 233 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 F8W8V4 182 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 GDF11O95390 407 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 RASSF4Q9H2L5 321 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 EPN1Q9Y6I3 576 aaPredicted RBP17.24■□□□□ 0.35
PTPN13-204ENST00000436978 FOXP4Q8IVH2 680 aaPredicted RBP17.24■□□□□ 0.35
PTPN13-204ENST00000436978 SEC31BQ9NQW1 1179 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 KLHL14Q9P2G3 628 aa17.24■□□□□ 0.35
PTPN13-204ENST00000436978 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.24■□□□□ 0.35
PTPN13-204ENST00000436978 ECE1P42892 770 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 DYNLL1P63167 89 aaKnown RBP17.23■□□□□ 0.35
PTPN13-204ENST00000436978 TTBK2Q6IQ55 1244 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 LCORLQ8N3X6 602 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 SGK1O00141 431 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 MCF2LO15068 1137 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 RFX6Q8HWS3 928 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 RNF10Q8N5U6 811 aaKnown RBP17.23■□□□□ 0.35
PTPN13-204ENST00000436978 APOL6Q9BWW8 343 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 RAB44Q7Z6P3 723 aaPredicted RBP17.23■□□□□ 0.35
PTPN13-204ENST00000436978 TCP11Q8WWU5 503 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 ADRA2BP18089 450 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 GUCY2FP51841 1108 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 LCMT1Q9UIC8 334 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 H7C0C1 242 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 U2AF2P26368 475 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPN13-204ENST00000436978 ATP5OP48047 213 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 FKBP3Q00688 224 aaKnown RBP17.23■□□□□ 0.35
PTPN13-204ENST00000436978 SLFN12LQ6IEE8 588 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 MGARPQ8TDB4 240 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 CALR3Q96L12 384 aaKnown RBP17.23■□□□□ 0.35
PTPN13-204ENST00000436978 GNAT1P11488 350 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 SLC27A3Q5K4L6 730 aa17.23■□□□□ 0.35
PTPN13-204ENST00000436978 IKBKBO14920 756 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 GABPB1Q06547 395 aaPredicted RBP17.22■□□□□ 0.35
PTPN13-204ENST00000436978 SLC38A10Q9HBR0 1119 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 ASNSP08243 561 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 XPAP23025 273 aaPredicted RBP17.22■□□□□ 0.35
PTPN13-204ENST00000436978 ARL6IP4Q66PJ3 421 aaKnown RBP17.22■□□□□ 0.35
PTPN13-204ENST00000436978 RSRC2Q7L4I2 434 aaKnown RBP17.22■□□□□ 0.35
PTPN13-204ENST00000436978 PIGBQ92521 554 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 TLR7Q9NYK1 1049 aaKnown RBP17.22■□□□□ 0.35
PTPN13-204ENST00000436978 TRMT2AQ8IZ69 625 aaKnown RBP17.22■□□□□ 0.35
PTPN13-204ENST00000436978 THAP9Q9H5L6 903 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 ZNF148Q9UQR1 794 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 MAPK4P31152 587 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 NXNQ6DKJ4 435 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 COL15A1P39059 1388 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 RAD17O75943 681 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 OAS2P29728 719 aaKnown RBP17.22■□□□□ 0.35
PTPN13-204ENST00000436978 AP3B2Q13367 1082 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 BRIP1Q9BX63 1249 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 CPSF3Q9UKF6 684 aaKnown RBP17.22■□□□□ 0.35
PTPN13-204ENST00000436978 LIFRP42702 1097 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 EFCAB13Q8IY85 973 aa17.22■□□□□ 0.35
PTPN13-204ENST00000436978 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.22■□□□□ 0.35
PTPN13-204ENST00000436978 SEPT12Q8IYM1 358 aa17.21■□□□□ 0.35
PTPN13-204ENST00000436978 PIGSQ96S52 555 aa17.21■□□□□ 0.35
PTPN13-204ENST00000436978 RFX7Q2KHR2 1363 aa17.21■□□□□ 0.35
PTPN13-204ENST00000436978 CDK8P49336 464 aa17.21■□□□□ 0.35
PTPN13-204ENST00000436978 RC3H1Q5TC82 1133 aaKnown RBP17.21■□□□□ 0.35
PTPN13-204ENST00000436978 MED4Q9NPJ6 270 aa17.21■□□□□ 0.35
PTPN13-204ENST00000436978 ESYT2A0FGR8 921 aa17.21■□□□□ 0.35
PTPN13-204ENST00000436978 JRKLQ9Y4A0 524 aa17.21■□□□□ 0.35
PTPN13-204ENST00000436978 CIITAP33076 1130 aa17.21■□□□□ 0.35
PTPN13-204ENST00000436978 KIAA1841Q6NSI8 718 aa17.21■□□□□ 0.35
PTPN13-204ENST00000436978 ZNF589Q86UQ0 364 aaPredicted RBP17.21■□□□□ 0.35
PTPN13-204ENST00000436978 RPF1Q9H9Y2 349 aaKnown RBP17.21■□□□□ 0.35
PTPN13-204ENST00000436978 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
PTPN13-204ENST00000436978 SKA2Q8WVK7 121 aaPredicted RBP17.21■□□□□ 0.35
PTPN13-204ENST00000436978 ABT1Q9ULW3 272 aaKnown RBP17.21■□□□□ 0.35
PTPN13-204ENST00000436978 PIM2Q9P1W9 311 aa17.21■□□□□ 0.34
PTPN13-204ENST00000436978 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 LRRC63Q05C16 580 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 APOBEC3FQ8IUX4 373 aaKnown RBP17.2■□□□□ 0.34
PTPN13-204ENST00000436978 FAM8A1Q9UBU6 413 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 FEM1BQ9UK73 627 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 SLC8A2Q9UPR5 921 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 RASSF7Q02833 373 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 ASPHQ12797 758 aa17.2■□□□□ 0.34
PTPN13-204ENST00000436978 PPP1R18Q6NYC8 613 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms