RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 RSPH10B2B2RC85 870 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 RSPH10BP0C881 870 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 TTI2Q6NXR4 508 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 CYP26C1Q6V0L0 522 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 CCDC42Q96M95 316 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 PANK4Q9NVE7 773 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 PI4KBQ9UBF8 816 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 GAKO14976 1311 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 N4BP1O75113 896 aaKnown RBP17.28■□□□□ 0.36
SCARF1-203ENST00000434376 PRPF6O94906 941 aaKnown RBP17.28■□□□□ 0.36
SCARF1-203ENST00000434376 CHMP4BP1P59074 171 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 RGS22Q8NE09 1264 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 P2RX7Q99572 595 aaKnown RBP17.28■□□□□ 0.36
SCARF1-203ENST00000434376 RABEP2Q9H5N1 569 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 RIOX1Q9H6W3 641 aa17.28■□□□□ 0.36
SCARF1-203ENST00000434376 MYO1CO00159 1063 aa17.27■□□□□ 0.36
SCARF1-203ENST00000434376 NDUFA10O95299 355 aa17.27■□□□□ 0.36
SCARF1-203ENST00000434376 GIMAP8Q8ND71 665 aaPredicted RBP17.27■□□□□ 0.36
SCARF1-203ENST00000434376 CCSER1Q9C0I3 900 aa17.27■□□□□ 0.36
SCARF1-203ENST00000434376 TMOD2Q9NZR1 351 aa17.27■□□□□ 0.36
SCARF1-203ENST00000434376 H3BQF6 201 aa17.27■□□□□ 0.36
SCARF1-203ENST00000434376 CCNE1P24864 410 aa17.27■□□□□ 0.36
SCARF1-203ENST00000434376 GPR161Q8N6U8 529 aaKnown RBP17.27■□□□□ 0.36
SCARF1-203ENST00000434376 HAS1Q92839 578 aa17.27■□□□□ 0.36
SCARF1-203ENST00000434376 MLXIPQ9HAP2 919 aa17.27■□□□□ 0.36
SCARF1-203ENST00000434376 SAMM50Q9Y512 469 aa17.27■□□□□ 0.36
SCARF1-203ENST00000434376 RCCD1A6NED2 376 aa17.27■□□□□ 0.35
SCARF1-203ENST00000434376 GABPAQ06546 454 aa17.27■□□□□ 0.35
SCARF1-203ENST00000434376 HSP90B2PQ58FF3 399 aa17.27■□□□□ 0.35
SCARF1-203ENST00000434376 OGFOD1Q8N543 542 aa17.27■□□□□ 0.35
SCARF1-203ENST00000434376 PCDHB13Q9Y5F0 798 aa17.27■□□□□ 0.35
SCARF1-203ENST00000434376 CNNM4Q6P4Q7 775 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 FBXO11Q86XK2 927 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 BHMT2Q9H2M3 363 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 GOLPH3Q9H4A6 298 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 LGALS16A8MUM7 142 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 EDIL3O43854 480 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 RHOBTB3O94955 611 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 KCNA1Q09470 495 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 FAM26FQ5R3K3 315 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 NOA1Q8NC60 698 aaKnown RBP17.26■□□□□ 0.35
SCARF1-203ENST00000434376 PROCA1Q8NCQ7 364 aaPredicted RBP17.26■□□□□ 0.35
SCARF1-203ENST00000434376 ELMO3Q96BJ8 720 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 LIMA1Q9UHB6 759 aaKnown RBP17.26■□□□□ 0.35
SCARF1-203ENST00000434376 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 PDS5AQ29RF7 1337 aaKnown RBP17.26■□□□□ 0.35
SCARF1-203ENST00000434376 MED24O75448 989 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 RAPGEF1Q13905 1077 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 ANKS1AQ92625 1134 aa17.26■□□□□ 0.35
SCARF1-203ENST00000434376 NCK2O43639 380 aa17.25■□□□□ 0.35
SCARF1-203ENST00000434376 PLA2G4BP0C869 781 aa17.25■□□□□ 0.35
SCARF1-203ENST00000434376 ARHGAP4P98171 946 aa17.25■□□□□ 0.35
SCARF1-203ENST00000434376 TMTC1Q8IUR5 882 aa17.25■□□□□ 0.35
SCARF1-203ENST00000434376 IPO4Q8TEX9 1081 aaKnown RBP17.25■□□□□ 0.35
SCARF1-203ENST00000434376 PANX2Q96RD6 677 aa17.25■□□□□ 0.35
SCARF1-203ENST00000434376 ACTN1P12814 892 aa17.25■□□□□ 0.35
SCARF1-203ENST00000434376 POLR2FP61218 127 aaKnown RBP17.25■□□□□ 0.35
SCARF1-203ENST00000434376 DLGAP5Q15398 846 aa17.25■□□□□ 0.35
SCARF1-203ENST00000434376 PODNQ7Z5L7 613 aa17.25■□□□□ 0.35
SCARF1-203ENST00000434376 JAKMIP2Q96AA8 810 aa17.25■□□□□ 0.35
SCARF1-203ENST00000434376 NHEJ1Q9H9Q4 299 aaPredicted RBP17.25■□□□□ 0.35
SCARF1-203ENST00000434376 FAN1Q9Y2M0 1017 aa17.25■□□□□ 0.35
SCARF1-203ENST00000434376 ECM29Q5VYK3 1845 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 TMCO5BA8MYB1 307 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 ATP1A1P05023 1023 aaKnown RBP17.24■□□□□ 0.35
SCARF1-203ENST00000434376 DACT2Q5SW24 774 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 SEPT11Q9NVA2 429 aaKnown RBP17.24■□□□□ 0.35
SCARF1-203ENST00000434376 PACSIN2Q9UNF0 486 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-203ENST00000434376 NRAPQ86VF7 1730 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 YDJCA8MPS7 323 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 CASP5P51878 434 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 COASYQ13057 564 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 SPA17Q15506 151 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 FOXR1Q6PIV2 292 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 PYM1Q9BRP8 204 aaKnown RBP17.24■□□□□ 0.35
SCARF1-203ENST00000434376 NDST4Q9H3R1 872 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 CEP350Q5VT06 3117 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 DOCK2Q92608 1830 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 BMP3P12645 472 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 KIAA1755Q5JYT7 1200 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 GALNT17Q6IS24 598 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 RAD54LQ92698 747 aa17.24■□□□□ 0.35
SCARF1-203ENST00000434376 PURBQ96QR8 312 aaKnown RBP17.24■□□□□ 0.35
SCARF1-203ENST00000434376 NAPGQ99747 312 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-203ENST00000434376 FAM86B1E9PN63 330 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 PSMD14O00487 310 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 MOCS3O95396 460 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 FAM86B2P0C5J1 330 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 GFPT1Q06210 699 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-203ENST00000434376 GPATCH4Q5T3I0 446 aaKnown RBP17.23■□□□□ 0.35
SCARF1-203ENST00000434376 FAM163AQ96GL9 167 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-203ENST00000434376 FUT8Q9BYC5 575 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 REXO2Q9Y3B8 237 aaKnown RBP17.23■□□□□ 0.35
SCARF1-203ENST00000434376 RRP15Q9Y3B9 282 aaKnown RBP17.23■□□□□ 0.35
SCARF1-203ENST00000434376 MYH8P13535 1937 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 GCNT3O95395 438 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 EIF4A3P38919 411 aaKnown RBP17.23■□□□□ 0.35
SCARF1-203ENST00000434376 DNM2P50570 870 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 RASSF7Q02833 373 aa17.23■□□□□ 0.35
SCARF1-203ENST00000434376 LLGL1Q15334 1064 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms