RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 PCDHA12Q9UN75 941 aa13.33□□□□□ -0.27
CTCFL-209ENST00000433949 MAPK8IP1Q9UQF2 711 aa13.33□□□□□ -0.27
CTCFL-209ENST00000433949 CYP3A7-CYP3A51PA0A087WV96 503 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 A0A1W2PQC6 194 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 CYP3A7P24462 503 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 CCT6AP40227 531 aaKnown RBP13.33□□□□□ -0.28
CTCFL-209ENST00000433949 RBL2Q08999 1139 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 PTPN21Q16825 1174 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 FAM83BQ5T0W9 1011 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 TTI2Q6NXR4 508 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 BTNL9Q6UXG8 535 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 UNC13DQ70J99 1090 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 REXO1L1PQ8IX06 675 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 SLFN12Q8IYM2 578 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 P2RX5Q93086 422 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 L2HGDHQ9H9P8 463 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 SNCAIPQ9Y6H5 919 aa13.33□□□□□ -0.28
CTCFL-209ENST00000433949 CCDC175P0C221 793 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 BMP3P12645 472 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 FECHP22830 423 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
CTCFL-209ENST00000433949 PSMD2Q13200 908 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 FOXR2Q6PJQ5 311 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 RAD54LQ92698 747 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 GOPCQ9HD26 462 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 BLOC1S4Q9NUP1 217 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 STK24Q9Y6E0 443 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 POTEMA6NI47 508 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 GYPCP04921 128 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 HMGCS2P54868 508 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 GOLGA8FQ08AF8 430 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 GOLGA8DPQ0D2H9 430 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 TMEM119Q4V9L6 283 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 HYIQ5T013 277 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 SYDE2Q5VT97 1194 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 SYT10Q6XYQ8 523 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 ARMC9Q7Z3E5 817 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 FBXO11Q86XK2 927 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 CSGALNACT2Q8N6G5 542 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 ZNF280CQ8ND82 737 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 HAS1Q92839 578 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 ERO1AQ96HE7 468 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 MBOAT7Q96N66 472 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 PNMA5Q96PV4 448 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
CTCFL-209ENST00000433949 ANO3Q9BYT9 981 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 VPS16Q9H269 839 aa13.32□□□□□ -0.28
CTCFL-209ENST00000433949 PCNTO95613 3336 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 TRIM49BA6NDI0 452 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 TBX3O15119 743 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 SLU7O95391 586 aaKnown RBP13.31□□□□□ -0.28
CTCFL-209ENST00000433949 CASP14P31944 242 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 DNM2P50570 870 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 UBXN1Q04323 297 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 IRF2BP1Q8IU81 584 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 TMTC1Q8IUR5 882 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 ANKRD13AQ8IZ07 590 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 ANKRD7Q92527 254 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 VCPKMTQ9H867 229 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 TAB2Q9NYJ8 693 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 USP17L15C9J2P7 530 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 USP17L13C9JLJ4 530 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 USP17L11C9JVI0 530 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 USP17L18D6R9N7 530 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 USP17L22D6RA61 530 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 USP17L17D6RBQ6 530 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 USP17L19D6RCP7 530 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 USP17L20D6RJB6 530 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 MEIS2O14770 477 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 FGFR1OPO95684 399 aaKnown RBP13.31□□□□□ -0.28
CTCFL-209ENST00000433949 ITGBL1O95965 494 aaPredicted RBP13.31□□□□□ -0.28
CTCFL-209ENST00000433949 USP17L24Q0WX57 530 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 STK4Q13043 487 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 TRIM65Q6PJ69 517 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 USP17L6PQ6QN14 398 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 IQCDQ96DY2 449 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 KCNMB3Q9NPA1 279 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 BMP2KQ9NSY1 1161 aaPredicted RBP13.31□□□□□ -0.28
CTCFL-209ENST00000433949 FBXO28Q9NVF7 368 aa13.31□□□□□ -0.28
CTCFL-209ENST00000433949 SPDYE3A6NKU9 549 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 PMS1P54277 932 aaKnown RBP13.3□□□□□ -0.28
CTCFL-209ENST00000433949 BACE1P56817 501 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 MCM6Q14566 821 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 CST9Q5W186 159 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 CREBRFQ8IUR6 639 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 GUF1Q8N442 669 aaKnown RBP13.3□□□□□ -0.28
CTCFL-209ENST00000433949 RETREG2Q8NC44 543 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 CRYGNQ8WXF5 182 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 KIFC2Q96AC6 838 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 SH2D4AQ9H788 454 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 AS3MTQ9HBK9 375 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 GBA2Q9HCG7 927 aaPredicted RBP13.3□□□□□ -0.28
CTCFL-209ENST00000433949 EMILIN3Q9NT22 766 aa13.3□□□□□ -0.28
CTCFL-209ENST00000433949 ABCB11O95342 1321 aa13.29□□□□□ -0.28
CTCFL-209ENST00000433949 MYMKA6NI61 221 aa13.29□□□□□ -0.28
CTCFL-209ENST00000433949 IRF6O14896 467 aa13.29□□□□□ -0.28
CTCFL-209ENST00000433949 STAT2P52630 851 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms