RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 KCND1Q9NSA2 647 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 VAV3Q9UKW4 847 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 FZD1Q9UP38 647 aa21.85■■□□□ 1.09
VRK2-205ENST00000432057 LRRC10BA6NIK2 292 aa21.84■■□□□ 1.09
VRK2-205ENST00000432057 N4BP3O15049 544 aa21.84■■□□□ 1.09
VRK2-205ENST00000432057 PPP1R2P41236 205 aa21.84■■□□□ 1.09
VRK2-205ENST00000432057 KCNJ6P48051 423 aa21.84■■□□□ 1.09
VRK2-205ENST00000432057 HAUS3Q68CZ6 603 aa21.84■■□□□ 1.09
VRK2-205ENST00000432057 ANKRD40Q6AI12 368 aa21.84■■□□□ 1.09
VRK2-205ENST00000432057 ARHGAP27Q6ZUM4 889 aa21.84■■□□□ 1.09
VRK2-205ENST00000432057 PRPF38AQ8NAV1 312 aaKnown RBP21.84■■□□□ 1.09
VRK2-205ENST00000432057 DNAJC19Q96DA6 116 aa21.84■■□□□ 1.09
VRK2-205ENST00000432057 GPRC5DQ9NZD1 345 aa21.84■■□□□ 1.09
VRK2-205ENST00000432057 PLA2G4BP0C869 781 aa21.83■■□□□ 1.09
VRK2-205ENST00000432057 ERMNQ8TAM6 284 aa21.83■■□□□ 1.09
VRK2-205ENST00000432057 EHMT1Q9H9B1 1298 aa21.83■■□□□ 1.09
VRK2-205ENST00000432057 BICDL2A1A5D9 508 aa21.83■■□□□ 1.08
VRK2-205ENST00000432057 TNNT1P13805 278 aa21.83■■□□□ 1.08
VRK2-205ENST00000432057 VCAM1P19320 739 aa21.83■■□□□ 1.08
VRK2-205ENST00000432057 EHHADHQ08426 723 aa21.83■■□□□ 1.08
VRK2-205ENST00000432057 SCYL3Q8IZE3 742 aa21.83■■□□□ 1.08
VRK2-205ENST00000432057 CSGALNACT2Q8N6G5 542 aa21.83■■□□□ 1.08
VRK2-205ENST00000432057 EMILIN3Q9NT22 766 aa21.83■■□□□ 1.08
VRK2-205ENST00000432057 GGA3Q9NZ52 723 aa21.83■■□□□ 1.08
VRK2-205ENST00000432057 SSC5DA1L4H1 1573 aa21.83■■□□□ 1.08
VRK2-205ENST00000432057 EEF1GP26641 437 aaKnown RBP21.82■■□□□ 1.08
VRK2-205ENST00000432057 COASYQ13057 564 aa21.82■■□□□ 1.08
VRK2-205ENST00000432057 CEP135Q66GS9 1140 aa21.82■■□□□ 1.08
VRK2-205ENST00000432057 GPBP1Q86WP2 473 aa21.82■■□□□ 1.08
VRK2-205ENST00000432057 CATSPER3Q86XQ3 398 aa21.82■■□□□ 1.08
VRK2-205ENST00000432057 NOC3LQ8WTT2 800 aaKnown RBP21.82■■□□□ 1.08
VRK2-205ENST00000432057 ZKSCAN4Q969J2 545 aaPredicted RBP21.82■■□□□ 1.08
VRK2-205ENST00000432057 WRNIP1Q96S55 665 aa21.82■■□□□ 1.08
VRK2-205ENST00000432057 SEMA6BQ9H3T3 888 aa21.82■■□□□ 1.08
VRK2-205ENST00000432057 UTRNP46939 3433 aa21.82■■□□□ 1.08
VRK2-205ENST00000432057 LMNB1P20700 586 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 ZFP91Q96JP5 570 aaPredicted RBP21.81■■□□□ 1.08
VRK2-205ENST00000432057 ZNF112Q9UJU3 913 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 LOXHD1Q8IVV2 1947 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 ITIH6Q6UXX5 1313 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 UQCRHLA0A096LP55 91 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 NPHP3-ACAD11A0A0J9YXS1 232 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 NFIBO00712 420 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 FLOT1O75955 427 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 UQCRHP07919 91 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 SPATA31C1P0DKV0 1188 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 HSD17B4P51659 736 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 RBL2Q08999 1139 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 SPP2Q13103 211 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 SLC30A10Q6XR72 485 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 NYAP1Q6ZVC0 841 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 PPFIBP1Q86W92 1011 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 CPXCR1Q8N123 301 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 GPC2Q8N158 579 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 GLIS3Q8NEA6 775 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 PPP1R13BQ96KQ4 1090 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 PRIMPOLQ96LW4 560 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 BAG1Q99933 345 aaPredicted RBP21.81■■□□□ 1.08
VRK2-205ENST00000432057 RPAP3Q9H6T3 665 aaPredicted RBP21.81■■□□□ 1.08
VRK2-205ENST00000432057 SLC38A10Q9HBR0 1119 aa21.81■■□□□ 1.08
VRK2-205ENST00000432057 RAVER2Q9HCJ3 691 aaKnown RBP21.81■■□□□ 1.08
VRK2-205ENST00000432057 MAGEC2Q9UBF1 373 aaPredicted RBP21.81■■□□□ 1.08
VRK2-205ENST00000432057 OTOFQ9HC10 1997 aa21.8■■□□□ 1.08
VRK2-205ENST00000432057 AKR1B15C9JRZ8 316 aaPredicted RBP21.8■■□□□ 1.08
VRK2-205ENST00000432057 EML1O00423 815 aa21.8■■□□□ 1.08
VRK2-205ENST00000432057 MEIS1O00470 390 aa21.8■■□□□ 1.08
VRK2-205ENST00000432057 RPA1P27694 616 aa21.8■■□□□ 1.08
VRK2-205ENST00000432057 EPS15P42566 896 aa21.8■■□□□ 1.08
VRK2-205ENST00000432057 PSMC6P62333 389 aa21.8■■□□□ 1.08
VRK2-205ENST00000432057 CLEC4DQ8WXI8 215 aa21.8■■□□□ 1.08
VRK2-205ENST00000432057 EEF2KMTQ96G04 330 aa21.8■■□□□ 1.08
VRK2-205ENST00000432057 FHDC1Q9C0D6 1143 aaPredicted RBP21.8■■□□□ 1.08
VRK2-205ENST00000432057 PANK4Q9NVE7 773 aa21.8■■□□□ 1.08
VRK2-205ENST00000432057 PPP1R9AQ9ULJ8 1098 aa21.8■■□□□ 1.08
VRK2-205ENST00000432057 TPM2P07951 284 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 ALAS1P13196 640 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 CYP11B2P19099 503 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 HIRAP54198 1017 aaPredicted RBP21.79■■□□□ 1.08
VRK2-205ENST00000432057 USP14P54578 494 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 SLC12A3P55017 1021 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 CACNB1Q02641 598 aaPredicted RBP21.79■■□□□ 1.08
VRK2-205ENST00000432057 CYP4A11Q02928 519 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 PSMD2Q13200 908 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 LRRC41Q15345 812 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 CENPPQ6IPU0 288 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 GUF1Q8N442 669 aaKnown RBP21.79■■□□□ 1.08
VRK2-205ENST00000432057 CPLX3Q8WVH0 158 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 CNOT6LQ96LI5 555 aaKnown RBP21.79■■□□□ 1.08
VRK2-205ENST00000432057 BMP2KQ9NSY1 1161 aaPredicted RBP21.79■■□□□ 1.08
VRK2-205ENST00000432057 COL20A1Q9P218 1284 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 PTPRFP10586 1907 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 GYPCP04921 128 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 PTPRAP18433 802 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 RAD51AP2Q09MP3 1159 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 PTPN14Q15678 1187 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 LRCH2Q5VUJ6 765 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 SLC5A5Q92911 643 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 PICK1Q9NRD5 415 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 HOMER2Q9NSB8 354 aa21.79■■□□□ 1.08
VRK2-205ENST00000432057 LGALS16A8MUM7 142 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms