RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 GOLGA8DPQ0D2H9 430 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 IKQ13123 557 aaPredicted RBP14.32□□□□□ -0.12
DDX56-204ENST00000431640 PTPN21Q16825 1174 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 KIAA1755Q5JYT7 1200 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 FOXR2Q6PJQ5 311 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 SYT10Q6XYQ8 523 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.32□□□□□ -0.12
DDX56-204ENST00000431640 CREBRFQ8IUR6 639 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 CSGALNACT2Q8N6G5 542 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 ACER1Q8TDN7 264 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 LRRC15Q8TF66 581 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 HAS1Q92839 578 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 NUP58Q9BVL2 599 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 ANO3Q9BYT9 981 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 TAB2Q9NYJ8 693 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 SNCAIPQ9Y6H5 919 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 TRPM7Q96QT4 1865 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 PTPRFP10586 1907 aa14.32□□□□□ -0.12
DDX56-204ENST00000431640 SLU7O95391 586 aaKnown RBP14.31□□□□□ -0.12
DDX56-204ENST00000431640 ITGBL1O95965 494 aaPredicted RBP14.31□□□□□ -0.12
DDX56-204ENST00000431640 FECHP22830 423 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 CASP14P31944 242 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 STK4Q13043 487 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 DGKZQ13574 1117 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 DCAF15Q66K64 600 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 IRF2BP1Q8IU81 584 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 MB21D1Q8N884 522 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 CPLX3Q8WVH0 158 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 IQCDQ96DY2 449 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 ERO1AQ96HE7 468 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 L2HGDHQ9H9P8 463 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
DDX56-204ENST00000431640 SPDYE3A6NKU9 549 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 LGALS16A8MUM7 142 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 USP17L15C9J2P7 530 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 USP17L13C9JLJ4 530 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 USP17L11C9JVI0 530 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 USP17L18D6R9N7 530 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 USP17L22D6RA61 530 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 USP17L17D6RBQ6 530 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 USP17L19D6RCP7 530 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 USP17L20D6RJB6 530 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 MEIS2O14770 477 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 USP17L24Q0WX57 530 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 VGLL4Q14135 290 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 MCM6Q14566 821 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 TSR1Q2NL82 804 aaKnown RBP14.3□□□□□ -0.12
DDX56-204ENST00000431640 SUPT20HL1Q3ZLR7 823 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 Q4G0T1 1027 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 TRIM65Q6PJ69 517 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 SCYL3Q8IZE3 742 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 GUF1Q8N442 669 aaKnown RBP14.3□□□□□ -0.12
DDX56-204ENST00000431640 KCTD17Q8N5Z5 321 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 RETREG2Q8NC44 543 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 CNKSR2Q8WXI2 1034 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 ANKRD7Q92527 254 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 CLMNQ96JQ2 1002 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 NUP88Q99567 741 aaPredicted RBP14.3□□□□□ -0.12
DDX56-204ENST00000431640 GPBP1L1Q9HC44 474 aaPredicted RBP14.3□□□□□ -0.12
DDX56-204ENST00000431640 KCNMB3Q9NPA1 279 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 TMX2Q9Y320 296 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 TRIM49BA6NDI0 452 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 POTEMA6NI47 508 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 MYMKA6NI61 221 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 CTNND1O60716 968 aaKnown RBP14.3□□□□□ -0.12
DDX56-204ENST00000431640 PLA2G6O60733 806 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 COBLO75128 1261 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 GYPCP04921 128 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 NOL9Q5SY16 702 aaKnown RBP14.3□□□□□ -0.12
DDX56-204ENST00000431640 ANKRD40Q6AI12 368 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 CENPPQ6IPU0 288 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 CYP26C1Q6V0L0 522 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 ERMNQ8TAM6 284 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 ZNF507Q8TCN5 953 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 CHURC1Q8WUH1 139 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 FAM20AQ96MK3 541 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 DUSP9Q99956 384 aaKnown RBP14.3□□□□□ -0.12
DDX56-204ENST00000431640 SH2D4AQ9H788 454 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 DNAI1Q9UI46 699 aa14.3□□□□□ -0.12
DDX56-204ENST00000431640 MYH7BA7E2Y1 1941 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 PIK3CDO00329 1044 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 PTPRAP18433 802 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 STAT2P52630 851 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 PMS1P54277 932 aaKnown RBP14.29□□□□□ -0.12
DDX56-204ENST00000431640 ARHGAP4P98171 946 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 LRRC63Q05C16 580 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 CST9Q5W186 159 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 HAUS3Q68CZ6 603 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 CHADLQ6NUI6 762 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 CRYGNQ8WXF5 182 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 TUBGCP2Q9BSJ2 902 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 ZNF408Q9H9D4 720 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 ABCB11O95342 1321 aa14.29□□□□□ -0.12
DDX56-204ENST00000431640 LOC285556D6RIA3 1793 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 PARP14Q460N5 1801 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 KIF20AO95235 890 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 ASNSP08243 561 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 CYP3A4P08684 503 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 FCER1AP12319 257 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms