RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 ST7Q9NRC1 585 aa7.49□□□□□ -1.21
PTPN4-204ENST00000431283 IQCA1LA6NCM1 817 aa7.48□□□□□ -1.21
PTPN4-204ENST00000431283 KRIT1O00522 736 aa7.48□□□□□ -1.21
PTPN4-204ENST00000431283 CYP7B1O75881 506 aa7.48□□□□□ -1.21
PTPN4-204ENST00000431283 TESK1Q15569 626 aa7.48□□□□□ -1.21
PTPN4-204ENST00000431283 SLC10A6Q3KNW5 377 aa7.48□□□□□ -1.21
PTPN4-204ENST00000431283 CLIC6Q96NY7 704 aa7.48□□□□□ -1.21
PTPN4-204ENST00000431283 KRTAP4-11Q9BYQ6 195 aa7.48□□□□□ -1.21
PTPN4-204ENST00000431283 LCP1P13796 627 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 PPP2R2AP63151 447 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 EFEMP1Q12805 493 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 MAP4K2Q12851 820 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 MCTP2Q6DN12 878 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 MCF2L2Q86YR7 1114 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 LGI4Q8N135 537 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 HNRNPLLQ8WVV9 542 aaKnown RBP7.47□□□□□ -1.21
PTPN4-204ENST00000431283 GPR20Q99678 358 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 TINF2Q9BSI4 451 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 IER2Q9BTL4 223 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 DUSP10Q9Y6W6 482 aa7.47□□□□□ -1.21
PTPN4-204ENST00000431283 MROH6A6NGR9 719 aa7.46□□□□□ -1.22
PTPN4-204ENST00000431283 DDX3XO00571 662 aaKnown RBP eCLIP7.46□□□□□ -1.22
PTPN4-204ENST00000431283 CYP1A1P04798 512 aaPredicted RBP7.46□□□□□ -1.22
PTPN4-204ENST00000431283 HSP90AA2PQ14568 343 aaPredicted RBP7.46□□□□□ -1.22
PTPN4-204ENST00000431283 ANKS3Q6ZW76 656 aa7.46□□□□□ -1.22
PTPN4-204ENST00000431283 PHOSPHO1Q8TCT1 267 aa7.46□□□□□ -1.22
PTPN4-204ENST00000431283 LCORQ96JN0 433 aaPredicted RBP7.46□□□□□ -1.22
PTPN4-204ENST00000431283 SYT3Q9BQG1 590 aa7.46□□□□□ -1.22
PTPN4-204ENST00000431283 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
PTPN4-204ENST00000431283 L2HGDHQ9H9P8 463 aa7.46□□□□□ -1.22
PTPN4-204ENST00000431283 DTLQ9NZJ0 730 aa7.46□□□□□ -1.22
PTPN4-204ENST00000431283 MYOTQ9UBF9 498 aa7.46□□□□□ -1.22
PTPN4-204ENST00000431283 FBXL7Q9UJT9 491 aa7.46□□□□□ -1.22
PTPN4-204ENST00000431283 ZNF536O15090 1300 aa7.46□□□□□ -1.22
PTPN4-204ENST00000431283 ARNTLO00327 626 aa7.45□□□□□ -1.22
PTPN4-204ENST00000431283 DDR2Q16832 855 aa7.45□□□□□ -1.22
PTPN4-204ENST00000431283 CR1LQ2VPA4 569 aa7.45□□□□□ -1.22
PTPN4-204ENST00000431283 SLC35F1Q5T1Q4 408 aa7.45□□□□□ -1.22
PTPN4-204ENST00000431283 USP53Q70EK8 1073 aa7.45□□□□□ -1.22
PTPN4-204ENST00000431283 TRIM48Q8IWZ4 208 aa7.45□□□□□ -1.22
PTPN4-204ENST00000431283 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.45□□□□□ -1.22
PTPN4-204ENST00000431283 WRNIP1Q96S55 665 aa7.45□□□□□ -1.22
PTPN4-204ENST00000431283 A0A1W2PQU0 124 aa7.44□□□□□ -1.22
PTPN4-204ENST00000431283 TCRBV5S2A0A599 114 aa7.44□□□□□ -1.22
PTPN4-204ENST00000431283 GRIA2P42262 883 aa7.44□□□□□ -1.22
PTPN4-204ENST00000431283 DENND5AQ6IQ26 1287 aa7.44□□□□□ -1.22
PTPN4-204ENST00000431283 TXNDC5Q8NBS9 432 aaKnown RBP7.44□□□□□ -1.22
PTPN4-204ENST00000431283 ARRDC4Q8NCT1 418 aa7.44□□□□□ -1.22
PTPN4-204ENST00000431283 SGSM3Q96HU1 749 aa7.44□□□□□ -1.22
PTPN4-204ENST00000431283 TMEM209Q96SK2 561 aa7.44□□□□□ -1.22
PTPN4-204ENST00000431283 SMOC1Q9H4F8 434 aa7.44□□□□□ -1.22
PTPN4-204ENST00000431283 GPR27Q9NS67 375 aa7.44□□□□□ -1.22
PTPN4-204ENST00000431283 NUB1Q9Y5A7 615 aa7.44□□□□□ -1.22
PTPN4-204ENST00000431283 TADA3O75528 432 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 RBM25P49756 843 aaKnown RBP7.43□□□□□ -1.22
PTPN4-204ENST00000431283 EMC4Q5J8M3 183 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 HHIPL2Q6UWX4 724 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 SLC43A3Q8NBI5 491 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 C1orf159Q96HA4 380 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 ZSWIM3Q96MP5 696 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 AARSD1Q9BTE6 412 aaKnown RBP7.43□□□□□ -1.22
PTPN4-204ENST00000431283 PHF20Q9BVI0 1012 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 TRIM55Q9BYV6 548 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 SMPD4Q9NXE4 827 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 CROTQ9UKG9 612 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 NPFFR2Q9Y5X5 522 aa7.43□□□□□ -1.22
PTPN4-204ENST00000431283 ABCC9O60706 1549 aa7.42□□□□□ -1.22
PTPN4-204ENST00000431283 PLATP00750 562 aa7.42□□□□□ -1.22
PTPN4-204ENST00000431283 ITGB3P05106 788 aa7.42□□□□□ -1.22
PTPN4-204ENST00000431283 SURF1Q15526 300 aa7.42□□□□□ -1.22
PTPN4-204ENST00000431283 ZXDCQ2QGD7 858 aaPredicted RBP7.42□□□□□ -1.22
PTPN4-204ENST00000431283 TEPPQ6URK8 271 aa7.42□□□□□ -1.22
PTPN4-204ENST00000431283 RSPO2Q6UXX9 243 aaPredicted RBP7.42□□□□□ -1.22
PTPN4-204ENST00000431283 PLEKHH3Q7Z736 793 aa7.42□□□□□ -1.22
PTPN4-204ENST00000431283 CELF2-AS1Q8N7Q2 184 aa7.42□□□□□ -1.22
PTPN4-204ENST00000431283 LOXL4Q96JB6 756 aa7.42□□□□□ -1.22
PTPN4-204ENST00000431283 TMEM168Q9H0V1 697 aa7.42□□□□□ -1.22
PTPN4-204ENST00000431283 INVSQ9Y283 1065 aa7.42□□□□□ -1.22
PTPN4-204ENST00000431283 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 U2SURPO15042 1029 aaKnown RBP7.41□□□□□ -1.22
PTPN4-204ENST00000431283 PRODHO43272 600 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 MAGEA10P43363 369 aaPredicted RBP7.41□□□□□ -1.22
PTPN4-204ENST00000431283 NFKB2Q00653 900 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 ADAM9Q13443 819 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 CYP4F22Q6NT55 531 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 GLB1LQ6UWU2 654 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 DPH6Q7L8W6 267 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 CHST13Q8NET6 341 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 DCAF4Q8WV16 495 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 ZNF428Q96B54 188 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 JAM3Q9BX67 310 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 PPP1R1BQ9UD71 204 aaPredicted RBP7.41□□□□□ -1.22
PTPN4-204ENST00000431283 FTSJ1Q9UET6 329 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 JAG2Q9Y219 1238 aa7.41□□□□□ -1.22
PTPN4-204ENST00000431283 DLX3O60479 287 aa7.4□□□□□ -1.22
PTPN4-204ENST00000431283 IL13P35225 146 aa7.4□□□□□ -1.22
PTPN4-204ENST00000431283 SPIRE1Q08AE8 756 aa7.4□□□□□ -1.22
PTPN4-204ENST00000431283 KIZQ2M2Z5 673 aa7.4□□□□□ -1.22
PTPN4-204ENST00000431283 TBC1D10BQ4KMP7 808 aaPredicted RBP7.4□□□□□ -1.22
PTPN4-204ENST00000431283 PRR31Q5SQ13 230 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms