RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 FBXO38Q6PIJ6 1188 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 POTEDQ86YR6 584 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 CCDC116Q8IYX3 515 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 REXO1Q8N1G1 1221 aaKnown RBP5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ANKK1Q8NFD2 765 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 OSBPL3Q9H4L5 887 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 ANO10Q9NW15 660 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 VPS18Q9P253 973 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 STK38LQ9Y2H1 464 aa5.85□□□□□ -1.47
PTPN4-203ENST00000430976 KRBA1A5PL33 1030 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 INO80B-WBP1J3KQ70 363 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 SLU7O95391 586 aaKnown RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 PDHBP11177 359 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 POU2F1P14859 743 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 ACAT1P24752 427 aaKnown RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 PCP4P48539 62 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 NR2C2P49116 596 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 BOLA3Q53S33 107 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 METTL11BQ5VVY1 283 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 CWF19L1Q69YN2 538 aaKnown RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 ADALQ6DHV7 355 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 TRIM58Q8NG06 486 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 AFAP1L1Q8TED9 768 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 FRS2Q8WU20 508 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 IQCDQ96DY2 449 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 OMA1Q96E52 524 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 FAM167BQ9BTA0 163 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 PACSIN1Q9BY11 444 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 QTRT2Q9H974 415 aaKnown RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 USP40Q9NVE5 1235 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 MCM9Q9NXL9 1143 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 MYO1AQ9UBC5 1043 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 TUBGCP4Q9UGJ1 667 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 PA2G4Q9UQ80 394 aaKnown RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 PLEKHG2Q9H7P9 1386 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 SNTNA6NMZ2 147 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 VWA5AO00534 786 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 NCK2O43639 380 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 KPNA6O60684 536 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 PDE5AO76074 875 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 PGRP06401 933 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 ATP5BP06576 529 aaKnown RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 KRT4P19013 534 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 KRT2P35908 639 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 HAAOP46952 286 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 CORO7P57737 925 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 NOP14P78316 857 aaKnown RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 P3H1Q32P28 736 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 GPATCH4Q5T3I0 446 aaKnown RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 TMEM164Q5U3C3 297 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 LVRNQ6Q4G3 990 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 ZBTB8BQ8NAP8 495 aaPredicted RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 TOR1AIP2Q8NFQ8 470 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 NSUN6Q8TEA1 469 aaKnown RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 SHC3Q92529 594 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 OPTNQ96CV9 577 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 RMDN1Q96DB5 314 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 PRPF18Q99633 342 aaKnown RBP5.84□□□□□ -1.47
PTPN4-203ENST00000430976 KCTD10Q9H3F6 313 aa5.84□□□□□ -1.47
PTPN4-203ENST00000430976 TMEM247A6NEH6 219 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 STX6O43752 255 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 SMPD2O60906 423 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 LRMPQ12912 555 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 FKBP5Q13451 457 aaPredicted RBP5.84□□□□□ -1.48
PTPN4-203ENST00000430976 KIAA1614Q5VZ46 1190 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 STRA8Q7Z7C7 330 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 RSPH3Q86UC2 560 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 VPS36Q86VN1 386 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 NLRP13Q86W25 1043 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 DEPDC4Q8N2C3 294 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 SMYD1Q8NB12 490 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC127Q96BQ5 260 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 BBS2Q9BXC9 721 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 SNX25Q9H3E2 840 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF287Q9HBT7 754 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 UCKL1Q9NWZ5 548 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 MRPL39Q9NYK5 338 aaKnown RBP5.84□□□□□ -1.48
PTPN4-203ENST00000430976 SENP1Q9P0U3 644 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF215Q9UL58 517 aaPredicted RBP5.84□□□□□ -1.48
PTPN4-203ENST00000430976 SLC8A2Q9UPR5 921 aa5.84□□□□□ -1.48
PTPN4-203ENST00000430976 KRT87PA6NCN2 255 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TTC34A8MYJ7 566 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 F8W810 466 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 IRS4O14654 1257 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 SNPHO15079 494 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 AHCYL1O43865 530 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 ADSLP30566 484 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 CPT1AP50416 773 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 PPARDQ03181 441 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 MAP2K5Q13163 448 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 SP140Q13342 867 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 GEN1Q17RS7 908 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 SPATA1Q5VX52 437 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC129Q6ZRS4 1044 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 FAM20CQ8IXL6 584 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 SUCLG2Q96I99 432 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 MOGAT1Q96PD6 335 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC77Q9BR77 488 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 XAB2Q9HCS7 855 aaKnown RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TRPS1Q9UHF7 1281 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms