RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 L1RE1Q9UN81 338 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 LEMD3Q9Y2U8 911 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 PCDHA8Q9Y5H6 950 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 ABCB11O95342 1321 aa9.71□□□□□ -0.86
GABPB1-205ENST00000429662 PSME4Q14997 1843 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 MYH6P13533 1939 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 YDJCA8MPS7 323 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 EIF3CLB5ME19 914 aaKnown RBP9.7□□□□□ -0.86
GABPB1-205ENST00000429662 WNT7AO00755 349 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 POLR3GO15318 223 aaPredicted RBP9.7□□□□□ -0.86
GABPB1-205ENST00000429662 CASP1P29466 404 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 PSEN2P49810 448 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 ZBED6P86452 979 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 AMPD2Q01433 879 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 PKN2Q16513 984 aaKnown RBP9.7□□□□□ -0.86
GABPB1-205ENST00000429662 AOC3Q16853 763 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 HSP90B2PQ58FF3 399 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 FAM47AQ5JRC9 791 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 FKBP15Q5T1M5 1219 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 PAPD7Q5XG87 772 aaKnown RBP9.7□□□□□ -0.86
GABPB1-205ENST00000429662 CCDC70Q6NSX1 233 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 CNNM4Q6P4Q7 775 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 TPTE2Q6XPS3 522 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 C15orf52Q6ZUT6 534 aaKnown RBP9.7□□□□□ -0.86
GABPB1-205ENST00000429662 TRAPPC11Q7Z392 1133 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 RASAL3Q86YV0 1011 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 LARGE2Q8N3Y3 721 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 ACRBPQ8NEB7 543 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 FAM71BQ8TC56 605 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 EIF3CQ99613 913 aaKnown RBP9.7□□□□□ -0.86
GABPB1-205ENST00000429662 SPZ1Q9BXG8 430 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 MKNK2Q9HBH9 465 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 C6orf50Q9HD87 102 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 PUF60Q9UHX1 559 aaKnown RBP9.7□□□□□ -0.86
GABPB1-205ENST00000429662 MAST2Q6P0Q8 1798 aa9.7□□□□□ -0.86
GABPB1-205ENST00000429662 TTC26A0AVF1 554 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 ESYT2A0FGR8 921 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-205ENST00000429662 KLRC4O43908 158 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 LDHBP07195 334 aaKnown RBP9.69□□□□□ -0.86
GABPB1-205ENST00000429662 IVLP07476 585 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 OR52Z1P0C646 297 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 TSPY3P0CV98 308 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 TSPY8P0CW00 308 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 ALDH1B1P30837 517 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 NOM1Q5C9Z4 860 aaKnown RBP9.69□□□□□ -0.86
GABPB1-205ENST00000429662 TTI2Q6NXR4 508 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 FBXO46Q6PJ61 603 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-205ENST00000429662 IRF2BP1Q8IU81 584 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 SLF2Q8IX21 1173 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 GOLGA5Q8TBA6 731 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 CELF1Q92879 486 aaKnown RBP9.69□□□□□ -0.86
GABPB1-205ENST00000429662 P2RX5Q93086 422 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 CALML4Q96GE6 196 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 ERGIC2Q96RQ1 377 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 SLF1Q9BQI6 1058 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 RTFDC1Q9BY42 306 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-205ENST00000429662 IRX2Q9BZI1 471 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-205ENST00000429662 EDEM3Q9BZQ6 932 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 ZMYND12Q9H0C1 365 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 R3HDMLQ9H3Y0 253 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 GBA2Q9HCG7 927 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-205ENST00000429662 ST7Q9NRC1 585 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 MAD2L2Q9UI95 211 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 GDAQ9Y2T3 454 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 SAR1BQ9Y6B6 198 aa9.69□□□□□ -0.86
GABPB1-205ENST00000429662 PVALEFA0A1B0GWK0 134 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 ADM5C9JUS6 153 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 STXBP3O00186 592 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 SLC26A4O43511 780 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 HRO43593 1189 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 USO1O60763 962 aaKnown RBP9.68□□□□□ -0.86
GABPB1-205ENST00000429662 RPS6KA5O75582 802 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 PRLRP16471 622 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 USP14P54578 494 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 ITIH3Q06033 890 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 TBC1D8BQ0IIM8 1120 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 NONOQ15233 471 aaKnown RBP eCLIP9.68□□□□□ -0.866e-6■□□□□ 10
GABPB1-205ENST00000429662 NAALADL2Q58DX5 795 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 CCDC122Q5T0U0 273 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 CC2D2BQ6DHV5 1058 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 KIAA1328Q86T90 577 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 CABP7Q86V35 215 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 ZSCAN29Q8IWY8 852 aaPredicted RBP9.68□□□□□ -0.86
GABPB1-205ENST00000429662 CSGALNACT2Q8N6G5 542 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 STAMQ92783 540 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 CCDC102AQ96A19 550 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 JAKMIP2Q96AA8 810 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 TUBGCP2Q9BSJ2 902 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 RAB34Q9BZG1 259 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 EPC1Q9H2F5 836 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 A0A1B0GUL6 1792 aa9.68□□□□□ -0.86
GABPB1-205ENST00000429662 ERICH4A6NGS2 130 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 TK2O00142 265 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 NMT2O60551 498 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 CYP2D6P10635 497 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 TRIM21P19474 475 aaKnown RBP9.67□□□□□ -0.86
GABPB1-205ENST00000429662 PRDX5P30044 214 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 HNRNPH3P31942 346 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms