RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.9□□□□□ -0.98
HPS4-205ENST00000429411 ABCC6O95255 1503 aa8.9□□□□□ -0.98
HPS4-205ENST00000429411 RCCD1A6NED2 376 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 GOLGA6L10A6NI86 522 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 SMIM23A6NLE4 172 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 ORC4O43929 436 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 PDE6BP35913 854 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 RCAN1P53805 252 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 RCSD1Q6JBY9 416 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 MAEAQ7L5Y9 396 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 APTXQ7Z2E3 356 aaKnown RBP8.9□□□□□ -0.99
HPS4-205ENST00000429411 LARGE2Q8N3Y3 721 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 FAM71BQ8TC56 605 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 COG1Q8WTW3 980 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 DHTKD1Q96HY7 919 aaPredicted RBP8.9□□□□□ -0.99
HPS4-205ENST00000429411 LRRC1Q9BTT6 524 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 GOLPH3Q9H4A6 298 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 THAP9Q9H5L6 903 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 BARHL2Q9NY43 387 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 PKD2L1Q9P0L9 805 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 ADAMTS1Q9UHI8 967 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 PCDHA12Q9UN75 941 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 L1RE1Q9UN81 338 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 SCAF8Q9UPN6 1271 aaKnown RBP8.9□□□□□ -0.99
HPS4-205ENST00000429411 PCDHA13Q9Y5I0 950 aa8.9□□□□□ -0.99
HPS4-205ENST00000429411 VAV2P52735 878 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 GUCY2DQ02846 1103 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 KLHL30Q0D2K2 578 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 TUBB2AQ13885 445 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 KIAA0753Q2KHM9 967 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 NAA35Q5VZE5 725 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 GLIS3Q8NEA6 775 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 DDX12PQ92771 950 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 TUBB2BQ9BVA1 445 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 CAPN11Q9UMQ6 739 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 CAPN6Q9Y6Q1 641 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 KCPQ6ZWJ8 1503 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 NRAPQ86VF7 1730 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 NPHP3-ACAD11A0A0J9YXS1 232 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 E9PMD0 336 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 KIAA0754O94854 1291 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 PCP11498 1178 aaKnown RBP8.89□□□□□ -0.99
HPS4-205ENST00000429411 LIG3P49916 1009 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP14P54578 494 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 LLGL1Q15334 1064 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 NPY5RQ15761 445 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 TTBK2Q6IQ55 1244 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 FBXO33Q7Z6M2 555 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 MYOCDQ8IZQ8 938 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 FAM133AQ8N9E0 248 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 TRIM58Q8NG06 486 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 SPATA20Q8TB22 786 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 BCAS4Q8TDM0 211 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 TBC1D5Q92609 795 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 NOX5Q96PH1 765 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 MTA3Q9BTC8 594 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 MYO1AQ9UBC5 1043 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 MAD2L2Q9UI95 211 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 GGA1Q9UJY5 639 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP17L15C9J2P7 530 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP17L13C9JLJ4 530 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP17L11C9JVI0 530 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP17L18D6R9N7 530 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP17L22D6RA61 530 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP17L17D6RBQ6 530 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP17L19D6RCP7 530 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP17L20D6RJB6 530 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 STXBP3O00186 592 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 NKRFO15226 690 aaKnown RBP eCLIP8.89□□□□□ -0.99
HPS4-205ENST00000429411 CEP104O60308 925 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 PAX3P23760 479 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 GNGT1P63211 74 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP17L24Q0WX57 530 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 GRM4Q14833 912 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 SLC9C1Q4G0N8 1177 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 TBC1D10BQ4KMP7 808 aaPredicted RBP8.89□□□□□ -0.99
HPS4-205ENST00000429411 NAALADL2Q58DX5 795 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 CFAP58Q5T655 872 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 C9orf131Q5VYM1 1079 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 USP17L6PQ6QN14 398 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 GPBP1Q86WP2 473 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 IRF2BP1Q8IU81 584 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 RDH13Q8NBN7 331 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 HDAC7Q8WUI4 952 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 KRT12Q99456 494 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 MXD3Q9BW11 206 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 CCDC113Q9H0I3 377 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 ZNF408Q9H9D4 720 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 PANK4Q9NVE7 773 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 REXO2Q9Y3B8 237 aaKnown RBP8.89□□□□□ -0.99
HPS4-205ENST00000429411 PCDHB13Q9Y5F0 798 aa8.89□□□□□ -0.99
HPS4-205ENST00000429411 MYO5AQ9Y4I1 1855 aaKnown RBP8.88□□□□□ -0.99
HPS4-205ENST00000429411 MYMKA6NI61 221 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 RAD17O75943 681 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 SLC1A4P43007 532 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 PABPC4Q13310 644 aaKnown RBP eCLIP8.88□□□□□ -0.99
HPS4-205ENST00000429411 VWA3BQ502W6 1294 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 FAM26FQ5R3K3 315 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 SFMBT2Q5VUG0 894 aa8.88□□□□□ -0.99
HPS4-205ENST00000429411 TSHZ1Q6ZSZ6 1077 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms