RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 PSMC6P62333 389 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 NOGQ13253 232 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 MCF2L2Q86YR7 1114 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 FAM133AQ8N9E0 248 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 TMEM87AQ8NBN3 555 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 ZBTB10Q96DT7 871 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 SRPRBQ9Y5M8 271 aaKnown RBP10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 MYPNQ86TC9 1320 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 ELNP15502 786 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 OAZ1P54368 228 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 ZNF445P59923 1031 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 AP3B2Q13367 1082 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 MTMR1Q13613 665 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 FAM110CQ1W6H9 321 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 ADALQ6DHV7 355 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 DTHD1Q6ZMT9 781 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 DPP9Q86TI2 863 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 MB21D1Q8N884 522 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 KCNG4Q8TDN1 519 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 ZNF577Q9BSK1 485 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 BLZF1Q9H2G9 400 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 SERTAD1Q9UHV2 236 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 SZT2Q5T011 3432 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 POTEB3A0JP26 581 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 POTEFA5A3E0 1075 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 IPO5O00410 1097 aaKnown RBP10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 PSMC4P43686 418 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 CHMP4BP1P59074 171 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 PNOCQ13519 176 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 CTTNQ14247 550 aaKnown RBP10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 POTEBQ6S5H4 581 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 CYFIP1Q7L576 1253 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 VSIG10LQ86VR7 867 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 BANK1Q8NDB2 785 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 ENGASEQ8NFI3 743 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 CD99L2Q8TCZ2 262 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 MRPS27Q92552 414 aaKnown RBP10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 HPS3Q969F9 1004 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 MTRQ99707 1265 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 KCNH3Q9ULD8 1083 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 PCDHA12Q9UN75 941 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 RPTORQ8N122 1335 aa10.75□□□□□ -0.69
HMGCLL1-206ENST00000428842 MED24O75448 989 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 ZNF202O95125 648 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 CCNE2O96020 404 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 SPIRE1Q08AE8 756 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 UGCGQ16739 394 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 TRIM50Q86XT4 487 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 FMR1NBQ8N0W7 255 aaPredicted RBP10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 CHST13Q8NET6 341 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 RASSF8Q8NHQ8 419 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 NSUN6Q8TEA1 469 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 PIGOQ8TEQ8 1089 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 MXRA8Q9BRK3 442 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 UNC45AQ9H3U1 944 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 KCNMB3Q9NPA1 279 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 IVNS1ABPQ9Y6Y0 642 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 ELP1O95163 1332 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 KIAA0100Q14667 2235 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 DNAJC25-GNG10A0A024R161 153 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 NPHP3-ACAD11A0A0J9YXS1 232 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 UNCXA6NJT0 531 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 E9PMD0 336 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 TNPO2O14787 897 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 CA12O43570 354 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 PRKCZQ05513 592 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 SREBF2Q12772 1141 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 LRCH2Q5VUJ6 765 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 RESP18Q5W5W9 173 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 PPP4R3AQ6IN85 833 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 ZFYVE28Q9HCC9 887 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 MORF4L1Q9UBU8 362 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 LRWD1Q9UFC0 647 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 SAMM50Q9Y512 469 aa10.74□□□□□ -0.69
HMGCLL1-206ENST00000428842 DHX15O43143 795 aaKnown RBP10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 PPP6R2O75170 966 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 FOSP01100 380 aaPredicted RBP10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 MYCNP04198 464 aaPredicted RBP10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 ADCYAP1R1P41586 468 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 TRAPPC10P48553 1259 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 USP11P51784 963 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 C1QTNF8P60827 252 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 ZSCAN23Q3MJ62 389 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 PCNX4Q63HM2 1172 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 ARMCX2Q7L311 632 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 PLEKHH3Q7Z736 793 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 PPP1R9BQ96SB3 815 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 VAV3Q9UKW4 847 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 SNAI1O95863 264 aaPredicted RBP10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 PLCG1P19174 1290 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 SYKP43405 635 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 NAALADL2Q58DX5 795 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 UTP14CQ5TAP6 766 aaKnown RBP10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 SMYD4Q8IYR2 804 aaPredicted RBP10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 UBIAD1Q9Y5Z9 338 aa10.73□□□□□ -0.69
HMGCLL1-206ENST00000428842 GAS7O60861 476 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms