RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 QRICH2Q9H0J4 1663 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 KLRF2D3W0D1 207 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 SART1O43290 800 aaKnown RBP9.71□□□□□ -0.85
CTNND1-208ENST00000428599 MED7O43513 233 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 DNAJC8O75937 253 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-208ENST00000428599 NPR1P16066 1061 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 SH3BGRP55822 239 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-208ENST00000428599 DALRD3Q5D0E6 543 aaKnown RBP9.71□□□□□ -0.85
CTNND1-208ENST00000428599 CAPN12Q6ZSI9 719 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 LRRC43Q8N309 656 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 FGD4Q96M96 766 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 MMTAG2Q9BU76 263 aaKnown RBP9.71□□□□□ -0.85
CTNND1-208ENST00000428599 HYOU1Q9Y4L1 999 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 SSH2Q76I76 1423 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 MED23Q9ULK4 1368 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 PASKQ96RG2 1323 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 INHBAP08476 426 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 ACTN1P12814 892 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 CIITAP33076 1130 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 ADAM9Q13443 819 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 MTX1Q13505 466 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 GRAPQ13588 217 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 HLFQ16534 295 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 GRAPLQ8TC17 118 aaPredicted RBP9.71□□□□□ -0.86
CTNND1-208ENST00000428599 CCDC17Q96LX7 622 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 SLITRK6Q9H5Y7 841 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 EVI5O60447 810 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 VPS41P49754 854 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 MORC3Q14149 939 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 SIX6OS1Q8N1H7 587 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 CCNYQ8ND76 341 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 TTC25Q96NG3 672 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 AMNQ9BXJ7 453 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 LRRC4Q9HBW1 653 aa9.71□□□□□ -0.86
CTNND1-208ENST00000428599 DPYSL4O14531 572 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 BAG2O95816 211 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 U2AF2P26368 475 aaKnown RBP eCLIP9.7□□□□□ -0.861e-10■■□□□ 14
CTNND1-208ENST00000428599 TBCCQ15814 346 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 STAMQ92783 540 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ZNF274Q96GC6 653 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-208ENST00000428599 STK38LQ9Y2H1 464 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 SAR1BQ9Y6B6 198 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 TMEM247A6NEH6 219 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 IFNA8P32881 189 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 DYNLL1P63167 89 aaKnown RBP9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ANKRD20A4Q4UJ75 823 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ANKRD20A8PQ5CZ79 823 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ANKRD20A2Q5SQ80 823 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ANKRD20A1Q5TYW2 823 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 LRCH2Q5VUJ6 765 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 PPP4R4Q6NUP7 873 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ARMCX2Q7L311 632 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 FANCBQ8NB91 859 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ZNF577Q9BSK1 485 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 E9PCH4 1651 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 FAM170AA1A519 330 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 TTI1O43156 1089 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ZNF75DP51815 510 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 SLC12A1Q13621 1099 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 CLEC4GQ6UXB4 293 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ABCF3Q9NUQ8 709 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 SGK1O00141 431 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 SOX5P35711 763 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 RBM6P78332 1123 aaKnown RBP9.7□□□□□ -0.86
CTNND1-208ENST00000428599 TAB3Q8N5C8 712 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-208ENST00000428599 RABEP2Q9H5N1 569 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 MOSPD1Q9UJG1 213 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ZMYM6O95789 1325 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 PYGLP06737 847 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 SERPINB6P35237 376 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 DNAAF3Q8N9W5 541 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 GJD4Q96KN9 370 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-208ENST00000428599 ACCSQ96QU6 501 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 FTOQ9C0B1 505 aaKnown RBP eCLIP9.7□□□□□ -0.862e-18■□□□□ 11.2
CTNND1-208ENST00000428599 ANTXR1Q9H6X2 564 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 KMT5AQ9NQR1 393 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 PNMA3Q9UL41 463 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 OVOS2A0A0G2JMS6 1433 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 OVOS2A0A0J9YW53 1432 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 CPSF1Q10570 1443 aaKnown RBP9.7□□□□□ -0.86
CTNND1-208ENST00000428599 OVOS2Q6IE36 1432 aa9.7□□□□□ -0.86
CTNND1-208ENST00000428599 OPHN1O60890 802 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 FMNL1O95466 1100 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 CPP00450 1065 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 SCG2P13521 617 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 RECQLP46063 649 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 GUCY2FP51841 1108 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 POLR2FP61218 127 aaKnown RBP9.69□□□□□ -0.86
CTNND1-208ENST00000428599 ZMYM1Q5SVZ6 1142 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 PI16Q6UXB8 463 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 TRIM42Q8IWZ5 723 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 OR8K1Q8NGG5 319 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 CFAP61Q8NHU2 1237 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 PI4K2BQ8TCG2 481 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 LRRC8CQ8TDW0 803 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 NUDCD1Q96RS6 583 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 EPS15L1Q9UBC2 864 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 STK17AQ9UEE5 414 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 RIPOR2Q9Y4F9 1068 aa9.69□□□□□ -0.86
CTNND1-208ENST00000428599 ADCY9O60503 1353 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms