RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 CUL4BQ13620 913 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 HHATQ5VTY9 493 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 SLITRK6Q9H5Y7 841 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 ADRA2BP18089 450 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 ALDH3A1P30838 453 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 PEX3P56589 373 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 ARHGEF6Q15052 776 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 THNSL1Q8IYQ7 743 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 TMEM260Q9NX78 707 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 BZW2Q9Y6E2 419 aaKnown RBP10.63□□□□□ -0.71
SNX13-203ENST00000428135 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 H7C1W4 665 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 GMNNO75496 209 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 CASP1P29466 404 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 GALNT17Q6IS24 598 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 RNF26Q9BY78 433 aaPredicted RBP10.62□□□□□ -0.71
SNX13-203ENST00000428135 GPR108Q9NPR9 543 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 CNOT7Q9UIV1 285 aaKnown RBP10.62□□□□□ -0.71
SNX13-203ENST00000428135 KIDINS220Q9ULH0 1771 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 ENC1O14682 589 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 ARHGAP6O43182 974 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 HADHQ16836 314 aaKnown RBP10.62□□□□□ -0.71
SNX13-203ENST00000428135 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.62□□□□□ -0.71
SNX13-203ENST00000428135 NBPF11Q86T75 865 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 TBC1D10CQ8IV04 446 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 SMYD2Q9NRG4 433 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 PTCH1Q13635 1447 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 ADCY1Q08828 1119 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 DDX41Q9UJV9 622 aaKnown RBP10.62□□□□□ -0.71
SNX13-203ENST00000428135 FER1L4A9Z1Z3 1794 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 PLCG1P19174 1290 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 NSFP46459 744 aaKnown RBP10.62□□□□□ -0.71
SNX13-203ENST00000428135 FAM186BQ8IYM0 893 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 SCYL1Q96KG9 808 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 BRIP1Q9BX63 1249 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 STAP2Q9UGK3 403 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 GRIN3BO60391 1043 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 MMP1P03956 469 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 RFX6Q8HWS3 928 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 RMDN3Q96TC7 470 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 TUBGCP2Q9BSJ2 902 aa10.62□□□□□ -0.71
SNX13-203ENST00000428135 ZBBXA8MT70 800 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 GFPT2O94808 682 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 CLCN1P35523 988 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 CYB5R4Q7L1T6 521 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 METTL23Q86XA0 190 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 CCNYQ8ND76 341 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 PRDM5Q9NQX1 630 aaPredicted RBP10.61□□□□□ -0.71
SNX13-203ENST00000428135 CPDO75976 1380 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 CROCC2H7BZ55 1655 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 A6NJR5 290 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 EHHADHQ08426 723 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 BARGINQ6ZT62 677 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 SAMD7Q7Z3H4 446 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 CEP95Q96GE4 821 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 NT5C1BQ96P26 610 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 ELP3Q9H9T3 547 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 UBE2TQ9NPD8 197 aaPredicted RBP10.61□□□□□ -0.71
SNX13-203ENST00000428135 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.61□□□□□ -0.71
SNX13-203ENST00000428135 ZNF215Q9UL58 517 aaPredicted RBP10.61□□□□□ -0.71
SNX13-203ENST00000428135 ZNF148Q9UQR1 794 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 ASNSP08243 561 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 CASP14P31944 242 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 CDO1Q16878 200 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 DPCR1Q3MIW9 517 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 GOLGA5Q8TBA6 731 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 NRBP1Q9UHY1 535 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 KCNG1Q9UIX4 513 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 GDAQ9Y2T3 454 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 PLA2G4BP0C869 781 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 COPB1P53618 953 aaKnown RBP10.61□□□□□ -0.71
SNX13-203ENST00000428135 PTK2Q05397 1052 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 ACCSQ96QU6 501 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 STRBPQ96SI9 672 aaKnown RBP10.61□□□□□ -0.71
SNX13-203ENST00000428135 BHMT2Q9H2M3 363 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
SNX13-203ENST00000428135 PNMA6FA0A0J9YX94 578 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 RNF8O76064 485 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 PSAPP07602 524 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 GKAP1Q5VSY0 366 aaPredicted RBP10.61□□□□□ -0.71
SNX13-203ENST00000428135 NXNQ6DKJ4 435 aa10.61□□□□□ -0.71
SNX13-203ENST00000428135 FOXP1Q9H334 677 aaPredicted RBP10.61□□□□□ -0.71
SNX13-203ENST00000428135 SUDS3Q9H7L9 328 aaPredicted RBP10.61□□□□□ -0.71
SNX13-203ENST00000428135 POTEMA6NI47 508 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 EBAG9O00559 213 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 TMCO4Q5TGY1 634 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 MCTP2Q6DN12 878 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 TMEM179Q6ZVK1 233 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 SDCCAG8Q86SQ7 713 aaPredicted RBP10.6□□□□□ -0.71
SNX13-203ENST00000428135 FAM133AQ8N9E0 248 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 RILPQ96NA2 401 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 NACC1Q96RE7 527 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 CXCR5P32302 372 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 SSTR3P32745 418 aaPredicted RBP10.6□□□□□ -0.71
SNX13-203ENST00000428135 ZNF157P51786 506 aaPredicted RBP10.6□□□□□ -0.71
SNX13-203ENST00000428135 KIF23Q02241 960 aaPredicted RBP10.6□□□□□ -0.71
SNX13-203ENST00000428135 CLEC10AQ8IUN9 316 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 PARD3BQ8TEW8 1205 aa10.6□□□□□ -0.71
SNX13-203ENST00000428135 HEXIM2Q96MH2 286 aaKnown RBP10.6□□□□□ -0.71
SNX13-203ENST00000428135 PCDHA6Q9UN73 950 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms