RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 TRIM67Q6ZTA4 783 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 PHLDB2Q86SQ0 1253 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 PASD1Q8IV76 773 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 CROCCP3Q8IVE0 287 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 ST13P4Q8IZP2 240 aaPredicted RBP6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 STK11IPQ8N1F8 1099 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 ARHGAP24Q8N264 748 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 TMTC2Q8N394 836 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 OGFOD1Q8N543 542 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 CNBD1Q8NA66 436 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZBTB8BQ8NAP8 495 aaPredicted RBP6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 ATP11CQ8NB49 1132 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 SPATA4Q8NEY3 305 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 DNAJC9Q8WXX5 260 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 TBC1D5Q92609 795 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 DPF2Q92785 391 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 PTPRN2Q92932 1015 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 AIDAQ96BJ3 306 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 NEUROD6Q96NK8 337 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 NDNQ99608 321 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 DNAJC7Q99615 494 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 HSD3B7Q9H2F3 369 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 IL1RAPL2Q9NP60 686 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 TIMMDC1Q9NPL8 285 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 GDF3Q9NR23 364 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 CCDC87Q9NVE4 849 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 GALNT8Q9NY28 637 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 AATFQ9NY61 560 aaKnown RBP eCLIP6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 SH3GLB1Q9Y371 365 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 EID1Q9Y6B2 187 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 DLG5Q8TDM6 1919 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 MROH7Q68CQ1 1323 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 MRC2Q9UBG0 1479 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 SPATA31D1Q6ZQQ2 1576 aa6.14□□□□□ -1.43
VTI1BP4-201ENST00000427516 PNMA6EA0A0J9YXQ4 647 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 SMIM31A0A1B0GVY4 71 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 A0A1W2PQJ5 194 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 PALM3A6NDB9 673 aaPredicted RBP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 LRRC10BA6NIK2 292 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 CCDC188H7C350 402 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 DNM1LO00429 736 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 JAK2O60674 1132 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 CPA1P15085 419 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 TRIM21P19474 475 aaKnown RBP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 IBSPP21815 317 aaPredicted RBP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 RXRBP28702 533 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 HPDP32754 393 aaPredicted RBP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 IL13P35225 146 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 DNM2P50570 870 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 SULT2A1Q06520 285 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 MAP2K5Q13163 448 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 NMIQ13287 307 aaPredicted RBP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 CCDC6Q16204 474 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 RILPL1Q5EBL4 403 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 FIGNQ5HY92 759 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 RASIP1Q5U651 963 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 CDKAL1Q5VV42 579 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 SPRYD7Q5W111 196 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 TMEM154Q6P9G4 183 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 TRAF7Q6Q0C0 670 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 BICDL1Q6ZP65 573 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 PPP1R42Q7Z4L9 355 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZNF554Q86TJ5 538 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 FAM186BQ8IYM0 893 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 SDR16C5Q8N3Y7 309 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 RBBP8NLQ8NC74 664 aaPredicted RBP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZCRB1Q8TBF4 217 aaKnown RBP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 AGAP11Q8TF27 550 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 STK32AQ8WU08 396 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 TAF4BQ92750 862 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 INPP5DQ92835 1189 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 HAUS1Q96CS2 278 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 THAP11Q96EK4 314 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 HIC2Q96JB3 615 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 CAPZA3Q96KX2 299 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 FAM81BQ96LP2 452 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 NOX5Q96PH1 765 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 TMEM237Q96Q45 408 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 PURBQ96QR8 312 aaKnown RBP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 XPO6Q96QU8 1125 aaKnown RBP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 SPSB2Q99619 263 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 DSCC1Q9BVC3 393 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 SLC6A16Q9GZN6 736 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 CARD9Q9H257 536 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 DCLRE1BQ9H816 532 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 RNPEPL1Q9HAU8 725 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 INTS13Q9NVM9 706 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 TMOD4Q9NZQ9 345 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 SCHIP1Q9P0W5 487 aaPredicted RBP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 SPATA7Q9P0W8 599 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 SLC12A6Q9UHW9 1150 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 TSPYL4Q9UJ04 414 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 PLAAQ9Y263 795 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 PCDHA5Q9Y5H7 936 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 USH1CQ9Y6N9 552 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 NEO1Q92859 1461 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 NFAT5O94916 1531 aa6.13□□□□□ -1.43
VTI1BP4-201ENST00000427516 ZNF233A6NK53 670 aa6.12□□□□□ -1.43
VTI1BP4-201ENST00000427516 H7C1D1 291 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms