RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 CXXC1Q9P0U4 656 aaPredicted RBP11.72□□□□□ -0.53
COMMD1-202ENST00000427417 MEIS2O14770 477 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 ZBTB43O43298 467 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 FIBPO43427 364 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 F2P00734 622 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 ACTN1P12814 892 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 HOXD8P13378 290 aaPredicted RBP11.71□□□□□ -0.53
COMMD1-202ENST00000427417 UBA1P22314 1058 aaKnown RBP11.71□□□□□ -0.53
COMMD1-202ENST00000427417 ICAM3P32942 547 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 PSEN2P49810 448 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 FGD1P98174 961 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 EXOSC10Q01780 885 aaKnown RBP11.71□□□□□ -0.53
COMMD1-202ENST00000427417 NEDD9Q14511 834 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 PTGISQ16647 500 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 PCNX4Q63HM2 1172 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 APOA5Q6Q788 366 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 OTOP2Q7RTS6 562 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 NLRX1Q86UT6 975 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 TEX2Q8IWB9 1127 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 CMTR1Q8N1G2 835 aaKnown RBP11.71□□□□□ -0.53
COMMD1-202ENST00000427417 CCDC82Q8N4S0 544 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 CAGE1Q8TC20 777 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 KAT2BQ92831 832 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 TIFAQ96CG3 184 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 VWCEQ96DN2 955 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 INPP4AQ96PE3 977 aaPredicted RBP11.71□□□□□ -0.53
COMMD1-202ENST00000427417 GTF2IRD1Q9UHL9 959 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 GBF1Q92538 1859 aa11.71□□□□□ -0.53
COMMD1-202ENST00000427417 MYO9BQ13459 2157 aa11.71□□□□□ -0.54
COMMD1-202ENST00000427417 SPDYE3A6NKU9 549 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
COMMD1-202ENST00000427417 REC8O95072 547 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 PARNO95453 639 aaKnown RBP11.7□□□□□ -0.54
COMMD1-202ENST00000427417 IQCF3P0C7M6 154 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 RCAN1P53805 252 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 MRPS9P82933 396 aaKnown RBP11.7□□□□□ -0.54
COMMD1-202ENST00000427417 MFSD10Q14728 455 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 GRIN2CQ14957 1233 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 RAB30Q15771 203 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 RTN1Q16799 776 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 KIAA0753Q2KHM9 967 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 HSDL1Q3SXM5 330 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 USP17L6PQ6QN14 398 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 METTL7BQ6UX53 244 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 HEATR3Q7Z4Q2 680 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 RAB11FIP4Q86YS3 637 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 RASEFQ8IZ41 740 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 GIMAP8Q8ND71 665 aaPredicted RBP11.7□□□□□ -0.54
COMMD1-202ENST00000427417 AFAP1L1Q8TED9 768 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 CDHR1Q96JP9 859 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 PBX4Q9BYU1 374 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 EHMT1Q9H9B1 1298 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 MSRAQ9UJ68 235 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 SLC4A7Q9Y6M7 1214 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 EYSQ5T1H1 3165 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 MYH7BA7E2Y1 1941 aa11.7□□□□□ -0.54
COMMD1-202ENST00000427417 KLF18A0A0U1RQI7 1052 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 CCDC196A0A1B0GTZ2 297 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 ZBBXA8MT70 800 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 SPATA31C2B4DYI2 1134 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 hCG_1984214I3L0E3 225 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 HAS3O00219 553 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 DLL1O00548 723 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 ZNF286BP0CG31 522 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 SP2Q02086 613 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 ADCK5Q3MIX3 580 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 GDF6Q6KF10 455 aaPredicted RBP11.69□□□□□ -0.54
COMMD1-202ENST00000427417 DEFB128Q7Z7B8 93 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 ZNF713Q8N859 430 aaPredicted RBP11.69□□□□□ -0.54
COMMD1-202ENST00000427417 MAFAQ8NHW3 353 aaPredicted RBP11.69□□□□□ -0.54
COMMD1-202ENST00000427417 GPKOWQ92917 476 aaPredicted RBP eCLIP11.69□□□□□ -0.54
COMMD1-202ENST00000427417 SENP7Q9BQF6 1050 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 ALG1Q9BT22 464 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 RTEL1Q9NZ71 1219 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 HDAC6Q9UBN7 1215 aa11.69□□□□□ -0.54
COMMD1-202ENST00000427417 TRIP12Q14669 1992 aaPredicted RBP11.68□□□□□ -0.54
COMMD1-202ENST00000427417 TANC1Q9C0D5 1861 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 TET1Q8NFU7 2136 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 hCG_1642624A0A1W2PR95 340 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 GOLGA8AA7E2F4 631 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 GOLGA8BA8MQT2 603 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 EPB41L2O43491 1005 aaKnown RBP11.68□□□□□ -0.54
COMMD1-202ENST00000427417 FOSL2P15408 326 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 HSPA4P34932 840 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 RABGGTBP53611 331 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 PTK7Q13308 1070 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 BLOC1S2Q6QNY1 142 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 KCNB2Q92953 911 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 GPRASP2Q96D09 838 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 TCEANC2Q96MN5 208 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 JAKMIP1Q96N16 626 aaKnown RBP11.68□□□□□ -0.54
COMMD1-202ENST00000427417 USP26Q9BXU7 913 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 FTOQ9C0B1 505 aaKnown RBP eCLIP11.68□□□□□ -0.54
COMMD1-202ENST00000427417 GLT8D2Q9H1C3 349 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 ZNF576Q9H609 170 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 ZNF215Q9UL58 517 aaPredicted RBP11.68□□□□□ -0.54
COMMD1-202ENST00000427417 BRPF3Q9ULD4 1205 aa11.68□□□□□ -0.54
COMMD1-202ENST00000427417 NAP1L2Q9ULW6 460 aaPredicted RBP11.68□□□□□ -0.54
COMMD1-202ENST00000427417 CNTNAP5Q8WYK1 1306 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms