RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 BUB1BO60566 1050 aaPredicted RBP8.24□□□□□ -1.09
LINC01108-201ENST00000427276 USP17L8P0C7I0 530 aa8.24□□□□□ -1.09
LINC01108-201ENST00000427276 CDC25CP30307 473 aa8.24□□□□□ -1.09
LINC01108-201ENST00000427276 TRAPPC10P48553 1259 aa8.24□□□□□ -1.09
LINC01108-201ENST00000427276 SKOR1P84550 965 aa8.24□□□□□ -1.09
LINC01108-201ENST00000427276 SUSD4Q5VX71 490 aa8.24□□□□□ -1.09
LINC01108-201ENST00000427276 KDM7AQ6ZMT4 941 aa8.24□□□□□ -1.09
LINC01108-201ENST00000427276 CCDC84Q86UT8 332 aaPredicted RBP8.24□□□□□ -1.09
LINC01108-201ENST00000427276 PARP9Q8IXQ6 854 aa8.24□□□□□ -1.09
LINC01108-201ENST00000427276 TNFRSF25Q93038 417 aa8.24□□□□□ -1.09
LINC01108-201ENST00000427276 TSG101Q99816 390 aa8.24□□□□□ -1.09
LINC01108-201ENST00000427276 FAM107AO95990 144 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 VIMP08670 466 aaKnown RBP8.23□□□□□ -1.09
LINC01108-201ENST00000427276 OR52Z1P0C646 297 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 LLGL1Q15334 1064 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 MAN2A1Q16706 1144 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 SPRED3Q2MJR0 410 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 ARL6IP4Q66PJ3 421 aaKnown RBP8.23□□□□□ -1.09
LINC01108-201ENST00000427276 MARCH10Q8NA82 808 aaPredicted RBP8.23□□□□□ -1.09
LINC01108-201ENST00000427276 LRRC15Q8TF66 581 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 THOC1Q96FV9 657 aaKnown RBP8.23□□□□□ -1.09
LINC01108-201ENST00000427276 TTYH3Q9C0H2 523 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 VCPKMTQ9H867 229 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 AMACRQ9UHK6 382 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 SAP30BPQ9UHR5 308 aaKnown RBP8.23□□□□□ -1.09
LINC01108-201ENST00000427276 FBXL5Q9UKA1 691 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 NIP7Q9Y221 180 aaKnown RBP eCLIP8.23□□□□□ -1.09
LINC01108-201ENST00000427276 MYH2Q9UKX2 1941 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 SIPA1L3O60292 1781 aaPredicted RBP8.23□□□□□ -1.09
LINC01108-201ENST00000427276 MYH6P13533 1939 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 POTEMA6NI47 508 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 A6NNZ2 444 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 KRIT1O00522 736 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 DAPK3O43293 454 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 DDAH1O94760 285 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 TSPY3P0CV98 308 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 TSPY8P0CW00 308 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 PAX7P23759 505 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 HSD17B3P37058 310 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 FNTAP49354 379 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 KCNB1Q14721 858 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 TUBB8Q3ZCM7 444 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 CYB5D1Q6P9G0 228 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 TBC1D1Q86TI0 1168 aaPredicted RBP8.23□□□□□ -1.09
LINC01108-201ENST00000427276 IQCKQ8N0W5 287 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 SLC44A5Q8NCS7 719 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 KIAA0895Q8NCT3 520 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 MGARPQ8TDB4 240 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 CELF4Q9BZC1 486 aaKnown RBP8.23□□□□□ -1.09
LINC01108-201ENST00000427276 DDX20Q9UHI6 824 aaKnown RBP8.23□□□□□ -1.09
LINC01108-201ENST00000427276 CD2APQ9Y5K6 639 aa8.23□□□□□ -1.09
LINC01108-201ENST00000427276 DCDC2CA8MYV0 355 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 HMGB1P1B2RPK0 211 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 CTNND1O60716 968 aaKnown RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 FSBPO95073 299 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 COPB2P35606 906 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 SLCO1A2P46721 670 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 DHX9Q08211 1270 aaKnown RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 TRIM28Q13263 835 aaKnown RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 CCDC152Q4G0S7 254 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 GKAP1Q5VSY0 366 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 DAAM2Q86T65 1068 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 ZNF444Q8N0Y2 327 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 CAVIN3Q969G5 261 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 SEC16BQ96JE7 1060 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 PLA2G12BQ9BX93 195 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 CRNKL1Q9BZJ0 848 aaKnown RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 PCDHA6Q9UN73 950 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 PCDHA8Q9Y5H6 950 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 PNPLA7Q6ZV29 1317 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 A0A087X0T9 212 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 SMCO2A6NFE2 343 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 FGFR1OPO95684 399 aaKnown RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 FAM228BP0C875 321 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 FLT3P36888 993 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 MKRN4PQ13434 485 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 DCAF17Q5H9S7 520 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 FAM83BQ5T0W9 1011 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 SPATS2Q86XZ4 545 aaKnown RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 SNX29Q8TEQ0 813 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 DYDC1Q8WWB3 177 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 HVCN1Q96D96 273 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 ZNF512BQ96KM6 892 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 ERGIC2Q96RQ1 377 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 KBTBD4Q9NVX7 518 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 TMEM260Q9NX78 707 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 DONSONQ9NYP3 566 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 DNM1LO00429 736 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 EPB41P11171 864 aaKnown RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 ACTN1P12814 892 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 FGFR2P21802 821 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 TNNI2P48788 182 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 GSCP56915 257 aaPredicted RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 ERVK-9P63128 1117 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 MYO1EQ12965 1108 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 ASIC2Q16515 512 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 PDXDC1Q6P996 788 aa8.22□□□□□ -1.09
LINC01108-201ENST00000427276 DZIP1Q86YF9 867 aaKnown RBP8.22□□□□□ -1.09
LINC01108-201ENST00000427276 LRRC45Q96CN5 670 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms