RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 RCBTB1Q8NDN9 531 aa8.06□□□□□ -1.12
LINC01040-201ENST00000425048 CHAMP1Q96JM3 812 aa8.06□□□□□ -1.12
LINC01040-201ENST00000425048 CLIC6Q96NY7 704 aa8.06□□□□□ -1.12
LINC01040-201ENST00000425048 TMEM168Q9H0V1 697 aa8.06□□□□□ -1.12
LINC01040-201ENST00000425048 ST6GALNAC2Q9UJ37 374 aa8.06□□□□□ -1.12
LINC01040-201ENST00000425048 H7BY64 318 aa8.05□□□□□ -1.12
LINC01040-201ENST00000425048 B4GALT3O60512 393 aa8.05□□□□□ -1.12
LINC01040-201ENST00000425048 ITGAVP06756 1048 aa8.05□□□□□ -1.12
LINC01040-201ENST00000425048 LSAMPQ13449 338 aa8.05□□□□□ -1.12
LINC01040-201ENST00000425048 ACBD5Q5T8D3 534 aaPredicted RBP8.05□□□□□ -1.12
LINC01040-201ENST00000425048 ACBD3Q9H3P7 528 aa8.05□□□□□ -1.12
LINC01040-201ENST00000425048 NPEPPSL1A6NEC2 478 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 TADA3O75528 432 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 FSHBP01225 129 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 LTBRP36941 435 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 KCNJ6P48051 423 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 TESK1Q15569 626 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 STEAP3Q658P3 488 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 FAM178BQ8IXR5 827 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 ARRDC4Q8NCT1 418 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 KISS1RQ969F8 398 aaPredicted RBP8.04□□□□□ -1.12
LINC01040-201ENST00000425048 DTLQ9NZJ0 730 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 PPP4R1LQ9P1A2 415 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 SRRDQ9UH36 339 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 PCDHB4Q9Y5E5 795 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 PCDHA2Q9Y5H9 948 aa8.04□□□□□ -1.12
LINC01040-201ENST00000425048 TCRBV5S2A0A599 114 aa8.03□□□□□ -1.12
LINC01040-201ENST00000425048 TBX1O43435 398 aa8.03□□□□□ -1.12
LINC01040-201ENST00000425048 ATF4P18848 351 aaPredicted RBP8.03□□□□□ -1.12
LINC01040-201ENST00000425048 TEPPQ6URK8 271 aa8.03□□□□□ -1.12
LINC01040-201ENST00000425048 C6orf15Q6UXA7 325 aaPredicted RBP8.03□□□□□ -1.12
LINC01040-201ENST00000425048 ZNF227Q86WZ6 799 aa8.03□□□□□ -1.12
LINC01040-201ENST00000425048 SLC16A11Q8NCK7 471 aa8.03□□□□□ -1.12
LINC01040-201ENST00000425048 MRRFQ96E11 262 aaKnown RBP8.03□□□□□ -1.12
LINC01040-201ENST00000425048 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
LINC01040-201ENST00000425048 SMAD7O15105 426 aaKnown RBP8.02□□□□□ -1.13
LINC01040-201ENST00000425048 DGKIO75912 1065 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 MLLT6P55198 1093 aaPredicted RBP8.02□□□□□ -1.13
LINC01040-201ENST00000425048 PPP2CBP62714 309 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 PPP2CAP67775 309 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 PPIL6Q8IXY8 311 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 SH3RF3Q8TEJ3 882 aaPredicted RBP8.02□□□□□ -1.13
LINC01040-201ENST00000425048 ZSWIM3Q96MP5 696 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 WRNIP1Q96S55 665 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 TMEM209Q96SK2 561 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 CLDND1Q9NY35 253 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 ACTR10Q9NZ32 417 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 FBXL7Q9UJT9 491 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 CROTQ9UKG9 612 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 TSC22D4Q9Y3Q8 395 aa8.02□□□□□ -1.13
LINC01040-201ENST00000425048 LRG1P02750 347 aa8.01□□□□□ -1.13
LINC01040-201ENST00000425048 SF1Q15637 639 aaKnown RBP8.01□□□□□ -1.13
LINC01040-201ENST00000425048 TNNI3KQ59H18 835 aa8.01□□□□□ -1.13
LINC01040-201ENST00000425048 EMC4Q5J8M3 183 aa8.01□□□□□ -1.13
LINC01040-201ENST00000425048 MBD6Q96DN6 1003 aa8.01□□□□□ -1.13
LINC01040-201ENST00000425048 CDK5RAP1Q96SZ6 601 aaKnown RBP8.01□□□□□ -1.13
LINC01040-201ENST00000425048 CCSER2Q9H7U1 834 aa8.01□□□□□ -1.13
LINC01040-201ENST00000425048 SUSD5O60279 629 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 MAFKO60675 156 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 LCP1P13796 627 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 ICAM4Q14773 271 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 PRSS53Q2L4Q9 553 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 LARP1BQ659C4 914 aaKnown RBP8□□□□□ -1.13
LINC01040-201ENST00000425048 ARHGEF18Q6ZSZ5 1173 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 VPS37DQ86XT2 251 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8□□□□□ -1.13
LINC01040-201ENST00000425048 KRTAP17-1Q9BYP8 105 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 SMOC1Q9H4F8 434 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 EPB41L1Q9H4G0 881 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 JADE2Q9NQC1 790 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 FTSJ1Q9UET6 329 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 MRVI1Q9Y6F6 885 aa8□□□□□ -1.13
LINC01040-201ENST00000425048 DDAH1O94760 285 aa7.99□□□□□ -1.13
LINC01040-201ENST00000425048 GFRA1P56159 465 aa7.99□□□□□ -1.13
LINC01040-201ENST00000425048 PKN3Q6P5Z2 889 aa7.99□□□□□ -1.13
LINC01040-201ENST00000425048 SPRED1Q7Z699 444 aa7.99□□□□□ -1.13
LINC01040-201ENST00000425048 CIR1Q86X95 450 aaPredicted RBP7.99□□□□□ -1.13
LINC01040-201ENST00000425048 KBTBD2Q8IY47 623 aa7.99□□□□□ -1.13
LINC01040-201ENST00000425048 KLHL36Q8N4N3 616 aa7.99□□□□□ -1.13
LINC01040-201ENST00000425048 PHOSPHO1Q8TCT1 267 aa7.99□□□□□ -1.13
LINC01040-201ENST00000425048 ZDHHC9Q9Y397 364 aa7.99□□□□□ -1.13
LINC01040-201ENST00000425048 B4GALT4O60513 344 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 SSBP05455 408 aaKnown RBP eCLIP7.98□□□□□ -1.13
LINC01040-201ENST00000425048 C6P13671 934 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 EPHB4P54760 987 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 DENND5AQ6IQ26 1287 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 TMEM145Q8NBT3 493 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 IGDCC4Q8TDY8 1250 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 SORCS2Q96PQ0 1159 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 KLC2Q9H0B6 622 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 DEF6Q9H4E7 631 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 BARX1Q9HBU1 254 aaPredicted RBP7.98□□□□□ -1.13
LINC01040-201ENST00000425048 HSPBP1Q9NZL4 362 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 MYOTQ9UBF9 498 aa7.98□□□□□ -1.13
LINC01040-201ENST00000425048 GPR42O15529 346 aa7.97□□□□□ -1.13
LINC01040-201ENST00000425048 GDF5P43026 501 aa7.97□□□□□ -1.13
LINC01040-201ENST00000425048 NFATC3Q12968 1075 aa7.97□□□□□ -1.13
LINC01040-201ENST00000425048 CDSNQ15517 529 aa7.97□□□□□ -1.13
LINC01040-201ENST00000425048 FXNQ16595 210 aa7.97□□□□□ -1.13
LINC01040-201ENST00000425048 TRMT10BQ6PF06 316 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms