RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 ERMNQ8TAM6 284 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 BAG1Q99933 345 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-202ENST00000424011 KIAA1683Q9H0B3 1180 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 DEFB129Q9H1M3 183 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 LIMA1Q9UHB6 759 aaKnown RBP18.45■□□□□ 0.54
CMTM3-202ENST00000424011 KIF2AO00139 706 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-202ENST00000424011 DDNO94850 711 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-202ENST00000424011 CCT6AP40227 531 aaKnown RBP18.45■□□□□ 0.54
CMTM3-202ENST00000424011 PBX1P40424 430 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 EPS15P42566 896 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 MCM6Q14566 821 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 C9orf131Q5VYM1 1079 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 CCDC174Q6PII3 467 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 UNC13DQ70J99 1090 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 ETNPPLQ8TBG4 499 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 TRPM4Q8TD43 1214 aa18.45■□□□□ 0.54
CMTM3-202ENST00000424011 ARHGAP6O43182 974 aa18.44■□□□□ 0.54
CMTM3-202ENST00000424011 HOXA13P31271 388 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-202ENST00000424011 CYP2C19P33261 490 aa18.44■□□□□ 0.54
CMTM3-202ENST00000424011 ZNF76P36508 570 aa18.44■□□□□ 0.54
CMTM3-202ENST00000424011 BMP2KQ9NSY1 1161 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-202ENST00000424011 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-202ENST00000424011 CFBP00751 764 aa18.44■□□□□ 0.54
CMTM3-202ENST00000424011 APOBEC3FQ8IUX4 373 aaKnown RBP18.44■□□□□ 0.54
CMTM3-202ENST00000424011 PRPF38AQ8NAV1 312 aaKnown RBP18.44■□□□□ 0.54
CMTM3-202ENST00000424011 P2RX7Q99572 595 aaKnown RBP18.44■□□□□ 0.54
CMTM3-202ENST00000424011 NUDT12Q9BQG2 462 aa18.44■□□□□ 0.54
CMTM3-202ENST00000424011 GLIS2Q9BZE0 524 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-202ENST00000424011 THAP9Q9H5L6 903 aa18.44■□□□□ 0.54
CMTM3-202ENST00000424011 PSMD2Q13200 908 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 KRT31Q15323 416 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 TCP11X2Q5H9J9 407 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 SYT10Q6XYQ8 523 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 REXO1L1PQ8IX06 675 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 MYH7BA7E2Y1 1941 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 MYMKA6NI61 221 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 KCNJ18B7U540 433 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 CCP110O43303 1012 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 STX10O60499 249 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 EEF1GP26641 437 aaKnown RBP18.43■□□□□ 0.54
CMTM3-202ENST00000424011 HIRAP54198 1017 aaPredicted RBP18.43■□□□□ 0.54
CMTM3-202ENST00000424011 KCNJ12Q14500 433 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 ANGEL2Q5VTE6 544 aaKnown RBP18.43■□□□□ 0.54
CMTM3-202ENST00000424011 FCHSD1Q86WN1 690 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 TRIM47Q96LD4 638 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 PNMA2Q9UL42 364 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 RABGAP1Q9Y3P9 1069 aa18.43■□□□□ 0.54
CMTM3-202ENST00000424011 FAM86B1E9PN63 330 aa18.42■□□□□ 0.54
CMTM3-202ENST00000424011 ICAM1P05362 532 aa18.42■□□□□ 0.54
CMTM3-202ENST00000424011 FAM86B2P0C5J1 330 aa18.42■□□□□ 0.54
CMTM3-202ENST00000424011 CCNE1P24864 410 aa18.42■□□□□ 0.54
CMTM3-202ENST00000424011 LDHDQ86WU2 507 aa18.42■□□□□ 0.54
CMTM3-202ENST00000424011 LENG9Q96B70 501 aa18.42■□□□□ 0.54
CMTM3-202ENST00000424011 SLF1Q9BQI6 1058 aa18.42■□□□□ 0.54
CMTM3-202ENST00000424011 MAGEC2Q9UBF1 373 aaPredicted RBP18.42■□□□□ 0.54
CMTM3-202ENST00000424011 TRIM49BA6NDI0 452 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 AKR1B15C9JRZ8 316 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-202ENST00000424011 N4BP3O15049 544 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 USP14P54578 494 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 HNRNPH2P55795 449 aaKnown RBP18.41■□□□□ 0.54
CMTM3-202ENST00000424011 RBL2Q08999 1139 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 FAM114A1Q8IWE2 563 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 KCTD17Q8N5Z5 321 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 DDX12PQ92771 950 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 P2RX5Q93086 422 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 EFCC1Q9HA90 598 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 ITIH6Q6UXX5 1313 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 PMS1P54277 932 aaKnown RBP18.41■□□□□ 0.54
CMTM3-202ENST00000424011 STK4Q13043 487 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 TTI2Q6NXR4 508 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 PPFIBP1Q86W92 1011 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 GJA10Q969M2 543 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 FBXO28Q9NVF7 368 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 KIAA1024Q9UPX6 916 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 PPP2R2CQ9Y2T4 447 aa18.41■□□□□ 0.54
CMTM3-202ENST00000424011 TPM1P09493 284 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 GPR162Q16538 588 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 CCDC84Q86UT8 332 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-202ENST00000424011 VPS16Q9H269 839 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 AS3MTQ9HBK9 375 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 TAB2Q9NYJ8 693 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.4■□□□□ 0.54
CMTM3-202ENST00000424011 COPB1P53618 953 aaKnown RBP18.4■□□□□ 0.54
CMTM3-202ENST00000424011 SPIRE1Q08AE8 756 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 ECM1Q16610 540 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 TRIM65Q6PJ69 517 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 TOGARAM2Q6ZUX3 1019 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 MCF2L2Q86YR7 1114 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 IRF2BP1Q8IU81 584 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 CSGALNACT2Q8N6G5 542 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 CPLX3Q8WVH0 158 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 YY1AP1Q9H869 796 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 CCPG1Q9ULG6 757 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 PPP2R3BQ9Y5P8 575 aa18.4■□□□□ 0.54
CMTM3-202ENST00000424011 MSH4O15457 936 aa18.39■□□□□ 0.53
CMTM3-202ENST00000424011 TAL1P17542 331 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-202ENST00000424011 RPA1P27694 616 aa18.39■□□□□ 0.53
CMTM3-202ENST00000424011 INPP5BP32019 993 aa18.39■□□□□ 0.53
CMTM3-202ENST00000424011 RAD51AP2Q09MP3 1159 aa18.39■□□□□ 0.53
CMTM3-202ENST00000424011 NBPF12Q5TAG4 269 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms