RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 RTEL1Q9NZ71 1219 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 KCNJ14Q9UNX9 436 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 MEIS1O00470 390 aa21.09■□□□□ 0.97
HDAC6-205ENST00000423941 FIBPO43427 364 aa21.09■□□□□ 0.97
HDAC6-205ENST00000423941 ACLYP53396 1101 aa21.09■□□□□ 0.97
HDAC6-205ENST00000423941 HMGN5P82970 282 aaKnown RBP21.09■□□□□ 0.97
HDAC6-205ENST00000423941 MLLT1Q03111 559 aaPredicted RBP21.09■□□□□ 0.97
HDAC6-205ENST00000423941 FSCN1Q16658 493 aaKnown RBP21.09■□□□□ 0.97
HDAC6-205ENST00000423941 NIPA1Q7RTP0 329 aa21.09■□□□□ 0.97
HDAC6-205ENST00000423941 PCSK9Q8NBP7 692 aaKnown RBP21.09■□□□□ 0.97
HDAC6-205ENST00000423941 RASGRP4Q8TDF6 673 aa21.09■□□□□ 0.97
HDAC6-205ENST00000423941 MXRA8Q9BRK3 442 aa21.09■□□□□ 0.97
HDAC6-205ENST00000423941 JADE2Q9NQC1 790 aa21.09■□□□□ 0.97
HDAC6-205ENST00000423941 MRVI1Q9Y6F6 885 aa21.09■□□□□ 0.97
HDAC6-205ENST00000423941 GH1P01241 217 aa21.08■□□□□ 0.97
HDAC6-205ENST00000423941 CIITAP33076 1130 aa21.08■□□□□ 0.97
HDAC6-205ENST00000423941 CUL4AQ13619 759 aa21.08■□□□□ 0.97
HDAC6-205ENST00000423941 CELF3Q5SZQ8 465 aaKnown RBP21.08■□□□□ 0.97
HDAC6-205ENST00000423941 MYSM1Q5VVJ2 828 aa21.08■□□□□ 0.97
HDAC6-205ENST00000423941 DOCK5Q9H7D0 1870 aa21.08■□□□□ 0.97
HDAC6-205ENST00000423941 ASGR1P07306 291 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 HOXD8P13378 290 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-205ENST00000423941 UBA1P22314 1058 aaKnown RBP21.07■□□□□ 0.96
HDAC6-205ENST00000423941 USP11P51784 963 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 BEX3Q00994 111 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 LAMC2Q13753 1193 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 SNX17Q15036 470 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 CEP55Q53EZ4 464 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 C1orf53Q5VUE5 145 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 NLRX1Q86UT6 975 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 OR6J1Q8NGC5 347 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 CYP2W1Q8TAV3 490 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 TNFRSF25Q93038 417 aa21.07■□□□□ 0.96
HDAC6-205ENST00000423941 SENP6Q9GZR1 1112 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-205ENST00000423941 IGLV3-22A0A075B6J6 115 aa21.06■□□□□ 0.96
HDAC6-205ENST00000423941 A0A1W2PQ45 241 aaPredicted RBP21.06■□□□□ 0.96
HDAC6-205ENST00000423941 A0A1W2PQY0 241 aa21.06■□□□□ 0.96
HDAC6-205ENST00000423941 CPT1AP50416 773 aa21.06■□□□□ 0.96
HDAC6-205ENST00000423941 CDHR1Q96JP9 859 aa21.06■□□□□ 0.96
HDAC6-205ENST00000423941 BCAS3Q9H6U6 928 aa21.06■□□□□ 0.96
HDAC6-205ENST00000423941 ELP1O95163 1332 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 FAM86B1E9PN63 330 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 ATP9AO75110 1047 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 MMP1P03956 469 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 FAM86B2P0C5J1 330 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 KCNA2P16389 499 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 NEDD9Q14511 834 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 KRT40Q6A162 431 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 SLC39A5Q6ZMH5 540 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 DHX37Q8IY37 1157 aaKnown RBP21.05■□□□□ 0.96
HDAC6-205ENST00000423941 OXER1Q8TDS5 423 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 SNX21Q969T3 373 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 HTATIP2Q9BUP3 242 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 KCNH7Q9NS40 1196 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 SCN10AQ9Y5Y9 1956 aa21.05■□□□□ 0.96
HDAC6-205ENST00000423941 CYP3A7-CYP3A51PA0A087WV96 503 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 ZEB2O60315 1214 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 KPNA6O60684 536 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 CABYRO75952 493 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 GGPS1O95749 300 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 CYP3A7P24462 503 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 PURAQ00577 322 aaKnown RBP21.04■□□□□ 0.96
HDAC6-205ENST00000423941 MTMR1Q13613 665 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 LRRC26Q2I0M4 334 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 KRT25Q7Z3Z0 450 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 FBXO18Q8NFZ0 1043 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 PPTC7Q8NI37 304 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 AFG1LQ8WV93 481 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 MBOAT7Q96N66 472 aa21.04■□□□□ 0.96
HDAC6-205ENST00000423941 MYCNP04198 464 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-205ENST00000423941 ARP10275 920 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 CDK7P50613 346 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 HSDL1Q3SXM5 330 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 MOXD1Q6UVY6 613 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 METTL7BQ6UX53 244 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 SLC43A3Q8NBI5 491 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 GIMAP8Q8ND71 665 aaPredicted RBP21.03■□□□□ 0.96
HDAC6-205ENST00000423941 TBCKQ8TEA7 893 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 FERMT2Q96AC1 680 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 LENG9Q96B70 501 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 POLR3EQ9NVU0 708 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 GRIN2DO15399 1336 aa21.03■□□□□ 0.96
HDAC6-205ENST00000423941 PPFIA4O75335 1185 aa21.02■□□□□ 0.96
HDAC6-205ENST00000423941 MMP3P08254 477 aa21.02■□□□□ 0.96
HDAC6-205ENST00000423941 NONOQ15233 471 aaKnown RBP eCLIP21.02■□□□□ 0.96
HDAC6-205ENST00000423941 BRDTQ58F21 947 aaPredicted RBP21.02■□□□□ 0.96
HDAC6-205ENST00000423941 CXCL17Q6UXB2 119 aa21.02■□□□□ 0.96
HDAC6-205ENST00000423941 GLT1D1Q96MS3 346 aa21.02■□□□□ 0.96
HDAC6-205ENST00000423941 NFASCO94856 1347 aa21.02■□□□□ 0.95
HDAC6-205ENST00000423941 BTBD18B2RXH4 712 aa21.01■□□□□ 0.95
HDAC6-205ENST00000423941 KRT2P35908 639 aa21.01■□□□□ 0.95
HDAC6-205ENST00000423941 NR5A1Q13285 461 aa21.01■□□□□ 0.95
HDAC6-205ENST00000423941 EARS2Q5JPH6 523 aaKnown RBP21.01■□□□□ 0.95
HDAC6-205ENST00000423941 CYFIP1Q7L576 1253 aa21.01■□□□□ 0.95
HDAC6-205ENST00000423941 C8orf76Q96K31 380 aa21.01■□□□□ 0.95
HDAC6-205ENST00000423941 SPATA33Q96N06 139 aa21.01■□□□□ 0.95
HDAC6-205ENST00000423941 MLXIPQ9HAP2 919 aa21.01■□□□□ 0.95
HDAC6-205ENST00000423941 AGO4Q9HCK5 861 aaKnown RBP21.01■□□□□ 0.95
HDAC6-205ENST00000423941 DHX15O43143 795 aaKnown RBP21■□□□□ 0.95
HDAC6-205ENST00000423941 ZNF76P36508 570 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms