RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 AGBL3Q8NEM8 1001 aa11.14□□□□□ -0.63
SSPN-202ENST00000422622 C7orf43Q8WVR3 580 aa11.14□□□□□ -0.63
SSPN-202ENST00000422622 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
SSPN-202ENST00000422622 GSDMAQ96QA5 445 aa11.14□□□□□ -0.63
SSPN-202ENST00000422622 RPAP3Q9H6T3 665 aaPredicted RBP11.14□□□□□ -0.63
SSPN-202ENST00000422622 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
SSPN-202ENST00000422622 TBC1D8BQ0IIM8 1120 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 NAA30Q147X3 362 aaPredicted RBP11.13□□□□□ -0.63
SSPN-202ENST00000422622 ZNF569Q5MCW4 686 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 ARHGEF16Q5VV41 709 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 CEP57Q86XR8 500 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 NOC4LQ9BVI4 516 aaKnown RBP11.13□□□□□ -0.63
SSPN-202ENST00000422622 BHMT2Q9H2M3 363 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 FAM207AQ9NSI2 230 aaPredicted RBP11.13□□□□□ -0.63
SSPN-202ENST00000422622 DDX60Q8IY21 1712 aaKnown RBP11.13□□□□□ -0.63
SSPN-202ENST00000422622 KCNJ18B7U540 433 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 NOP2P46087 812 aaKnown RBP11.13□□□□□ -0.63
SSPN-202ENST00000422622 KCNJ12Q14500 433 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 TRPM4Q8TD43 1214 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 GDAP1L1Q96MZ0 367 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 PURBQ96QR8 312 aaKnown RBP11.13□□□□□ -0.63
SSPN-202ENST00000422622 ZNF577Q9BSK1 485 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 KCNF1Q9H3M0 494 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 VCPKMTQ9H867 229 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 NF2P35240 595 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 KRT26Q7Z3Y9 468 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 NCAPG2Q86XI2 1143 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 DDX12PQ92771 950 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 PPP1R12BO60237 982 aaPredicted RBP11.13□□□□□ -0.63
SSPN-202ENST00000422622 GCNT3O95395 438 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 BMP6P22004 513 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 PPP2R3AQ06190 1150 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 ERCC6LQ2NKX8 1250 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 MYCT1Q8N699 235 aa11.13□□□□□ -0.63
SSPN-202ENST00000422622 ZNF215Q9UL58 517 aaPredicted RBP11.13□□□□□ -0.63
SSPN-202ENST00000422622 USO1O60763 962 aaKnown RBP11.12□□□□□ -0.63
SSPN-202ENST00000422622 SPATA1Q5VX52 437 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 HAUS3Q68CZ6 603 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 BANK1Q8NDB2 785 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 ANKS1AQ92625 1134 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 PANK4Q9NVE7 773 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 GOLGA6L9A6NEM1 432 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 IRX3P78415 501 aaPredicted RBP11.12□□□□□ -0.63
SSPN-202ENST00000422622 CNNM4Q6P4Q7 775 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 MOB2Q70IA6 237 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 ANKRD35Q8N283 1001 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 MRFAP1L1Q96HT8 127 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 BAG1Q99933 345 aaPredicted RBP11.12□□□□□ -0.63
SSPN-202ENST00000422622 MRPL44Q9H9J2 332 aaKnown RBP11.12□□□□□ -0.63
SSPN-202ENST00000422622 NHSQ6T4R5 1651 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 B4DLN1 442 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 KCNA3P22001 575 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 SF3A3Q12874 501 aaKnown RBP eCLIP11.12□□□□□ -0.63
SSPN-202ENST00000422622 STK4Q13043 487 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 SNRNP48Q6IEG0 339 aaKnown RBP11.12□□□□□ -0.63
SSPN-202ENST00000422622 CCDC65Q8IXS2 484 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 ATG4CQ96DT6 458 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 SLF1Q9BQI6 1058 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 EHD4Q9H223 541 aa11.12□□□□□ -0.63
SSPN-202ENST00000422622 USP27XA6NNY8 438 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 UTP14CQ5TAP6 766 aaKnown RBP11.11□□□□□ -0.63
SSPN-202ENST00000422622 KIAA1524Q8TCG1 905 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 SNED1Q8TER0 1413 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 NFIBO00712 420 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 CCDC175P0C221 793 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 PLA2G4BP0C869 781 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 SPECC1LQ69YQ0 1117 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 RBM43Q6ZSC3 357 aaKnown RBP11.11□□□□□ -0.63
SSPN-202ENST00000422622 GOLGA1Q92805 767 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 ERO1AQ96HE7 468 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 RASSF4Q9H2L5 321 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 NLRC4Q9NPP4 1024 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 TUBE1Q9UJT0 475 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 PCDHB13Q9Y5F0 798 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 ADM5C9JUS6 153 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 KRT9P35527 623 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 DPYDQ12882 1025 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.11□□□□□ -0.63
SSPN-202ENST00000422622 CLIC2O15247 247 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 CASP14P31944 242 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 KIAA1755Q5JYT7 1200 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 FAM26FQ5R3K3 315 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 ZNF658Q5TYW1 1059 aaPredicted RBP11.11□□□□□ -0.63
SSPN-202ENST00000422622 MIER3Q7Z3K6 550 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.11□□□□□ -0.63
SSPN-202ENST00000422622 TNFRSF25Q93038 417 aa11.11□□□□□ -0.63
SSPN-202ENST00000422622 GSTTP1A0A1W2PQM5 241 aa11.1□□□□□ -0.63
SSPN-202ENST00000422622 ARHGEF35A5YM69 484 aa11.1□□□□□ -0.63
SSPN-202ENST00000422622 CCDC169A6NNP5 214 aa11.1□□□□□ -0.63
SSPN-202ENST00000422622 SEPT14Q6ZU15 432 aa11.1□□□□□ -0.63
SSPN-202ENST00000422622 PRPF38AQ8NAV1 312 aaKnown RBP11.1□□□□□ -0.63
SSPN-202ENST00000422622 CTAGE1Q96RT6 745 aa11.1□□□□□ -0.63
SSPN-202ENST00000422622 RMDN3Q96TC7 470 aa11.1□□□□□ -0.63
SSPN-202ENST00000422622 AKR1B15C9JRZ8 316 aaPredicted RBP11.1□□□□□ -0.63
SSPN-202ENST00000422622 LAD1O00515 517 aa11.1□□□□□ -0.63
SSPN-202ENST00000422622 HARSP12081 509 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms