RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 SMYD2Q9NRG4 433 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 ZNF148Q9UQR1 794 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 RNF8O76064 485 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 RBL2Q08999 1139 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 PCDHA5Q9Y5H7 936 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 PPP6R2O75170 966 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 MFAP3P55082 362 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 NEDD9Q14511 834 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 DPCR1Q3MIW9 517 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 TMCO4Q5TGY1 634 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 FAM186BQ8IYM0 893 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 BANK1Q8NDB2 785 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 FNDC3AQ9Y2H6 1198 aaKnown RBP11.58□□□□□ -0.56
COL12A1-203ENST00000416123 ZHX2Q9Y6X8 837 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 RGS16O15492 202 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-203ENST00000416123 SARNPP82979 210 aaKnown RBP11.58□□□□□ -0.56
COL12A1-203ENST00000416123 PLCB4Q15147 1175 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 RNF207Q6ZRF8 634 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 TSC1Q92574 1164 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 NEDD4P46934 1319 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 NRKQ7Z2Y5 1582 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 PNMA6FA0A0J9YX94 578 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 GFPT2O94808 682 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 CYP2E1P05181 493 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-203ENST00000416123 RUFY4Q6ZNE9 571 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 SLC44A5Q8NCS7 719 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 FAM149B1Q96BN6 582 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 WRNIP1Q96S55 665 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 ABCA6Q8N139 1617 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 LAD1O00515 517 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 METTL23Q86XA0 190 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 NACC1Q96RE7 527 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 METTL14Q9HCE5 456 aaKnown RBP11.58□□□□□ -0.56
COL12A1-203ENST00000416123 GTF2A1P52655 376 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-203ENST00000416123 BFSP1Q12934 665 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 NT5C1BQ96P26 610 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 CPDO75976 1380 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 PLA2G4BP0C869 781 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 RIC8AQ9NPQ8 531 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 ZNF215Q9UL58 517 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-203ENST00000416123 AFPP02771 609 aaKnown RBP11.57□□□□□ -0.56
COL12A1-203ENST00000416123 SATB1Q01826 763 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 RPS6KA2Q15349 733 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 FAM133AQ8N9E0 248 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 MCUR1Q96AQ8 359 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 HAUS1Q96CS2 278 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 ATP1A2P50993 1020 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 STK38LQ9Y2H1 464 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 OAS2P29728 719 aaKnown RBP11.57□□□□□ -0.56
COL12A1-203ENST00000416123 SLC39A14Q15043 492 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 SLC38A10Q9HBR0 1119 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 POLD4Q9HCU8 107 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 TTC19Q6DKK2 380 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-203ENST00000416123 CELF1Q92879 486 aaKnown RBP11.57□□□□□ -0.56
COL12A1-203ENST00000416123 ZNF668Q96K58 619 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-203ENST00000416123 RPS6KA4O75676 772 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 PSAPP07602 524 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-203ENST00000416123 EPN1Q9Y6I3 576 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-203ENST00000416123 ABCC12Q96J65 1359 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 PHBP35232 272 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 C11orf57Q6ZUT1 292 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-203ENST00000416123 TRIML1Q8N9V2 468 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 HYOU1Q9Y4L1 999 aa11.57□□□□□ -0.56
COL12A1-203ENST00000416123 ABCB11O95342 1321 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 ATF2P15336 505 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 B4GALNT4Q76KP1 1039 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 VSIG1Q86XK7 387 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 CCDC51Q96ER9 411 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 PSDA5PKW4 1024 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-203ENST00000416123 NOL3O60936 208 aaKnown RBP11.56□□□□□ -0.56
COL12A1-203ENST00000416123 GSTA1P08263 222 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 GSTA2P09210 222 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 MAPK4P31152 587 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 PEX3P56589 373 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 ZNF658Q5TYW1 1059 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-203ENST00000416123 RAPH1Q70E73 1250 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 CYB5R4Q7L1T6 521 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 GRK7Q8WTQ7 553 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 WDR11Q9BZH6 1224 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 ECE1P42892 770 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 GPSM2P81274 684 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 TRMT2AQ8IZ69 625 aaKnown RBP11.56□□□□□ -0.56
COL12A1-203ENST00000416123 P2RX5Q93086 422 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 PARVGQ9HBI0 331 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 FEZ2Q9UHY8 353 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-203ENST00000416123 POLR2BP30876 1174 aaKnown RBP11.56□□□□□ -0.56
COL12A1-203ENST00000416123 POC1B-GALNT4F8VUJ3 575 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 BZW2Q9Y6E2 419 aaKnown RBP11.56□□□□□ -0.56
COL12A1-203ENST00000416123 CHRNA5P30532 468 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 KIF11P52732 1056 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 CCNYQ8ND76 341 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 AK8Q96MA6 479 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 CFAP57Q96MR6 1250 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 ZMYND10O75800 440 aa11.56□□□□□ -0.56
COL12A1-203ENST00000416123 CACTINQ8WUQ7 758 aaKnown RBP11.56□□□□□ -0.56
COL12A1-203ENST00000416123 KIF23Q02241 960 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-203ENST00000416123 PRPSAP1Q14558 356 aa11.55□□□□□ -0.56
COL12A1-203ENST00000416123 PPP4R1Q8TF05 950 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms