RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 FBXO11Q86XK2 927 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 ZNF713Q8N859 430 aaPredicted RBP10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 LBHD1Q9BQE6 289 aaPredicted RBP10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 AP5M1Q9H0R1 490 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 TMEM260Q9NX78 707 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 MRVI1Q9Y6F6 885 aa10.49□□□□□ -0.73
CHRNA1-206ENST00000416004 ALPK3Q96L96 1907 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 SPTLC2O15270 562 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 DUSP11O75319 330 aaKnown RBP10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 IGHA2P01877 340 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 ZNF865P0CJ78 1059 aaPredicted RBP10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 COL6A1P12109 1028 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 LIG1P18858 919 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 MARCKSP29966 332 aaPredicted RBP10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 MRE11P49959 708 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 ATN1P54259 1190 aaPredicted RBP10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 TERF1P54274 439 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 CNTN2Q02246 1040 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 PDE4DQ08499 809 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 LRRC41Q15345 812 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 UBE2SQ16763 222 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 BRDTQ58F21 947 aaPredicted RBP10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 PPP1R18Q6NYC8 613 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 CHRDL2Q6WN34 429 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 FAM177A1Q8N128 213 aaPredicted RBP10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 FAM133AQ8N9E0 248 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 DNERQ8NFT8 737 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 VTI1AQ96AJ9 217 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 TSEN34Q9BSV6 310 aaKnown RBP10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 C6orf50Q9HD87 102 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 TMEM63CQ9P1W3 806 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 PCDHA7Q9UN72 937 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 PCDHA1Q9Y5I3 950 aa10.48□□□□□ -0.73
CHRNA1-206ENST00000416004 MOXD2PA6NHM9 499 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 OPLAHO14841 1288 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 SNAI1O95863 264 aaPredicted RBP10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 MBD3O95983 291 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 C6orf222P0C671 652 aaPredicted RBP10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 ME1P48163 572 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 ADCY7P51828 1080 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 TNFAIP2Q03169 654 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 BAATQ14032 418 aaPredicted RBP10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 CCDC144BQ3MJ40 725 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 JAKMIP3Q5VZ66 844 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 KCNG4Q8TDN1 519 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 GLT1D1Q96MS3 346 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 AMNQ9BXJ7 453 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 VTA1Q9NP79 307 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 RIC8AQ9NPQ8 531 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 ATP11BQ9Y2G3 1177 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 PGK1P00558 417 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 XRCC6P12956 609 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 GNA11P29992 359 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 ADCYAP1R1P41586 468 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 ZNF174Q15697 407 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 INF2Q27J81 1249 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 HABP4Q5JVS0 413 aaKnown RBP10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 TTC38Q5R3I4 469 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 AXDND1Q5T1B0 1012 aaPredicted RBP10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 IQSEC1Q6DN90 963 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 SLC39A5Q6ZMH5 540 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 REXO1Q8N1G1 1221 aaKnown RBP10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 SAMD3Q8N6K7 520 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 GOLPH3LQ9H4A5 285 aa10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 COLQQ9Y215 455 aaPredicted RBP10.47□□□□□ -0.73
CHRNA1-206ENST00000416004 MROH7Q68CQ1 1323 aa10.46□□□□□ -0.73
CHRNA1-206ENST00000416004 CCDC194A0A1B0GVG4 234 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 A0A1W2PPC1 479 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 NFIBO00712 420 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 EDIL3O43854 480 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 CLK2P49760 499 aaKnown RBP10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 MNX1P50219 401 aaPredicted RBP10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 ALDH5A1P51649 535 aaPredicted RBP10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 RTP1P59025 263 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 GRIN1Q05586 938 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 LRRC26Q2I0M4 334 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 USP17L6PQ6QN14 398 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 FERMT2Q96AC1 680 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 CLIC6Q96NY7 704 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 PSTPIP2Q9H939 334 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 STARD7Q9NQZ5 370 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 MAP3K20Q9NYL2 800 aaKnown RBP10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 ZMYND8Q9ULU4 1186 aaPredicted RBP10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 PHF24Q9UPV7 400 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 BRCA2P51587 3418 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 SYNRGQ9UMZ2 1314 aa10.46□□□□□ -0.74
CHRNA1-206ENST00000416004 GOLGA6L4A6NEF3 574 aa10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 SOWAHBA6NEL2 793 aa10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 GNASQ5JWF2 1037 aa10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 EEPD1Q7L9B9 569 aa10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 KRT25Q7Z3Z0 450 aa10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 BICD2Q8TD16 824 aa10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 CUL5Q93034 780 aa10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 PRDM5Q9NQX1 630 aaPredicted RBP10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 FBXO2Q9UK22 296 aaPredicted RBP10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 NOL7Q9UMY1 257 aaKnown RBP10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 Q9Y3F1 56 aa10.45□□□□□ -0.74
CHRNA1-206ENST00000416004 DCDC2CA8MYV0 355 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms