RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 SLF1Q9BQI6 1058 aa7.49□□□□□ -1.21
HDAC8-211ENST00000415409 ANO3Q9BYT9 981 aa7.49□□□□□ -1.21
HDAC8-211ENST00000415409 TANGO6Q9C0B7 1094 aa7.49□□□□□ -1.21
HDAC8-211ENST00000415409 TMEM60Q9H2L4 133 aa7.49□□□□□ -1.21
HDAC8-211ENST00000415409 CBX8Q9HC52 389 aa7.49□□□□□ -1.21
HDAC8-211ENST00000415409 TMOD4Q9NZQ9 345 aa7.49□□□□□ -1.21
HDAC8-211ENST00000415409 PKD2L1Q9P0L9 805 aa7.49□□□□□ -1.21
HDAC8-211ENST00000415409 TUBE1Q9UJT0 475 aa7.49□□□□□ -1.21
HDAC8-211ENST00000415409 ZHX2Q9Y6X8 837 aa7.49□□□□□ -1.21
HDAC8-211ENST00000415409 ABCB11O95342 1321 aa7.49□□□□□ -1.21
HDAC8-211ENST00000415409 MYH1P12882 1939 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 ZNF646O15015 1829 aaPredicted RBP7.48□□□□□ -1.21
HDAC8-211ENST00000415409 IQCA1LA6NCM1 817 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 PIK3CDO00329 1044 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 BIN1O00499 593 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 MEIS2O14770 477 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 PPP1R12BO60237 982 aaPredicted RBP7.48□□□□□ -1.21
HDAC8-211ENST00000415409 FLOT1O75955 427 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 ICAM1P05362 532 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 VCAM1P19320 739 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 BRD2P25440 801 aaKnown RBP7.48□□□□□ -1.21
HDAC8-211ENST00000415409 STAT6P42226 847 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 TXKP42681 527 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 IREB2P48200 963 aaKnown RBP7.48□□□□□ -1.21
HDAC8-211ENST00000415409 BACE1P56817 501 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 ARHGAP4P98171 946 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 MDM2Q00987 491 aaPredicted RBP7.48□□□□□ -1.21
HDAC8-211ENST00000415409 PNOCQ13519 176 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 MTMR2Q13614 643 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 Q3C1V9 767 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 RRAGBQ5VZM2 374 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 BRICD5Q6PL45 260 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 MOXD1Q6UVY6 613 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 RNF19BQ6ZMZ0 732 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 KRT26Q7Z3Y9 468 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 CABP7Q86V35 215 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 LDHDQ86WU2 507 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 MCF2L2Q86YR7 1114 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 TRIML1Q8N9V2 468 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 ERCC4Q92889 916 aaPredicted RBP7.48□□□□□ -1.21
HDAC8-211ENST00000415409 CALML4Q96GE6 196 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 CCSER1Q9C0I3 900 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 CUEDC2Q9H467 287 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 MAGEF1Q9HAY2 307 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 FBXO28Q9NVF7 368 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 DDX25Q9UHL0 483 aaKnown RBP7.48□□□□□ -1.21
HDAC8-211ENST00000415409 DACH1Q9UI36 760 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 CCPG1Q9ULG6 757 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 CSADQ9Y600 493 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 FOCADQ5VW36 1801 aa7.48□□□□□ -1.21
HDAC8-211ENST00000415409 CYP3A7-CYP3A51PA0A087WV96 503 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 GLTPD2A6NH11 291 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 SMTNL1A8MU46 457 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 POTECB2RU33 542 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 USP2O75604 605 aaPredicted RBP7.47□□□□□ -1.21
HDAC8-211ENST00000415409 TDP2O95551 362 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 CFBP00751 764 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 MYL1P05976 194 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 CYP3A7P24462 503 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 EPHX2P34913 555 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 ZNF76P36508 570 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 SREBF1P36956 1147 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 TECP42680 631 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 PRKG1Q13976 671 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 PDIA5Q14554 519 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 KRT79Q5XKE5 535 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 C11orf57Q6ZUT1 292 aaPredicted RBP7.47□□□□□ -1.21
HDAC8-211ENST00000415409 SH3RF1Q7Z6J0 888 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 LUZP1Q86V48 1076 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 SLFN12Q8IYM2 578 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 MLKLQ8NB16 471 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.47□□□□□ -1.21
HDAC8-211ENST00000415409 PAGE5Q96GU1 130 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 CDK5RAP3Q96JB5 506 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 C12orf42Q96LP6 360 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 MTMR9Q96QG7 549 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 BPIFA3Q9BQP9 254 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 RPAP3Q9H6T3 665 aaPredicted RBP7.47□□□□□ -1.21
HDAC8-211ENST00000415409 AAASQ9NRG9 546 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 DISC1Q9NRI5 854 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 RMND1Q9NWS8 449 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 LRWD1Q9UFC0 647 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 PPP1R9AQ9ULJ8 1098 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 PCDHA5Q9Y5H7 936 aa7.47□□□□□ -1.21
HDAC8-211ENST00000415409 A0A087X0B3 334 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 TTC24A2A3L6 582 aaPredicted RBP7.46□□□□□ -1.22
HDAC8-211ENST00000415409 ADM5C9JUS6 153 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 TBX3O15119 743 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 FOXN1O15353 648 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 SLC26A4O43511 780 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 SLC37A4O43826 429 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 ADCY5O95622 1261 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 CYP3A4P08684 503 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 HOXA13P31271 388 aaPredicted RBP7.46□□□□□ -1.22
HDAC8-211ENST00000415409 CIITAP33076 1130 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 AFMP43652 599 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 SARSP49591 514 aaKnown RBP7.46□□□□□ -1.22
HDAC8-211ENST00000415409 HMGCS2P54868 508 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 AMPD3Q01432 767 aa7.46□□□□□ -1.22
HDAC8-211ENST00000415409 MAP2K5Q13163 448 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms