RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 CLK2P49760 499 aaKnown RBP11.54□□□□□ -0.56
TMEM248-202ENST00000413593 PSMC6P62333 389 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 SP2Q02086 613 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 SSRP1Q08945 709 aaKnown RBP11.54□□□□□ -0.56
TMEM248-202ENST00000413593 SEMA3FQ13275 785 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 AP3B2Q13367 1082 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 ITGA7Q13683 1181 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 LAMC2Q13753 1193 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 MYSM1Q5VVJ2 828 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 DHX37Q8IY37 1157 aaKnown RBP11.54□□□□□ -0.56
TMEM248-202ENST00000413593 SLC43A3Q8NBI5 491 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 CCDC148Q8NFR7 591 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 PGBD1Q96JS3 809 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 KIF2CQ99661 725 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 GDF15Q99988 308 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 MTG1Q9BT17 334 aaPredicted RBP11.54□□□□□ -0.56
TMEM248-202ENST00000413593 ANO3Q9BYT9 981 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 C22orf23Q9BZE7 217 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 PRO3102Q9H379 93 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 EHMT1Q9H9B1 1298 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 C6orf50Q9HD87 102 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 TMEM260Q9NX78 707 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 PCDH10Q9P2E7 1040 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 COLQQ9Y215 455 aaPredicted RBP11.54□□□□□ -0.56
TMEM248-202ENST00000413593 GRIN2DO15399 1336 aa11.54□□□□□ -0.56
TMEM248-202ENST00000413593 TRIM43BA6NCK2 446 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 DCDC2CA8MYV0 355 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 FIBPO43427 364 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 CDKL5O76039 1030 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 LARGE1O95461 756 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 CLTBP09497 229 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 ITGB5P18084 799 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 MAGEA10P43363 369 aaPredicted RBP11.53□□□□□ -0.56
TMEM248-202ENST00000413593 RBM25P49756 843 aaKnown RBP11.53□□□□□ -0.56
TMEM248-202ENST00000413593 FAAP100Q0VG06 881 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 ME3Q16798 604 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 CELF3Q5SZQ8 465 aaKnown RBP11.53□□□□□ -0.56
TMEM248-202ENST00000413593 JAKMIP3Q5VZ66 844 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 SH3RF1Q7Z6J0 888 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 NLRX1Q86UT6 975 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
TMEM248-202ENST00000413593 PPTC7Q8NI37 304 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 TRIM43Q96BQ3 446 aaPredicted RBP11.53□□□□□ -0.56
TMEM248-202ENST00000413593 GPRASP2Q96D09 838 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 SEZ6LQ9BYH1 1024 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 BCAS3Q9H6U6 928 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 PRDM5Q9NQX1 630 aaPredicted RBP11.53□□□□□ -0.56
TMEM248-202ENST00000413593 SH3GLB2Q9NR46 395 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 VPS54Q9P1Q0 977 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 PRKAG2Q9UGJ0 569 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 GTF3C3Q9Y5Q9 886 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 UBIAD1Q9Y5Z9 338 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 MROH7Q68CQ1 1323 aa11.53□□□□□ -0.56
TMEM248-202ENST00000413593 SORBS3O60504 671 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 CTDNEP1O95476 244 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 HOXD8P13378 290 aaPredicted RBP11.52□□□□□ -0.57
TMEM248-202ENST00000413593 GNA11P29992 359 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 SREBF1P36956 1147 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 NEDD9Q14511 834 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 DGKDQ16760 1214 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 HSDL1Q3SXM5 330 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 MCTP2Q6DN12 878 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 FAM126BQ8IXS8 530 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 REXO1Q8N1G1 1221 aaKnown RBP11.52□□□□□ -0.57
TMEM248-202ENST00000413593 NECAB1Q8N987 351 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 GTF3C6Q969F1 213 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 SPATA33Q96N06 139 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 AIFM3Q96NN9 605 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 SENP7Q9BQF6 1050 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 MLXIPQ9HAP2 919 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 JADE2Q9NQC1 790 aa11.52□□□□□ -0.57
TMEM248-202ENST00000413593 KIAA0355O15063 1070 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 PPFIA4O75335 1185 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 ARHGAP4P98171 946 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
TMEM248-202ENST00000413593 MTMR1Q13613 665 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 NBPF20Q3BBV1 942 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 METTL7BQ6UX53 244 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 CYFIP1Q7L576 1253 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 FAM177A1Q8N128 213 aaPredicted RBP11.51□□□□□ -0.57
TMEM248-202ENST00000413593 BICD2Q8TD16 824 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 RASGRP4Q8TDF6 673 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 CRYGNQ8WXF5 182 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 KAT2BQ92831 832 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 CDHR1Q96JP9 859 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 MXRA8Q9BRK3 442 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 TMEM39AQ9NV64 488 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 TBX21Q9UL17 535 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 STK36Q9NRP7 1315 aa11.51□□□□□ -0.57
TMEM248-202ENST00000413593 TLR3O15455 904 aaKnown RBP11.5□□□□□ -0.57
TMEM248-202ENST00000413593 MAFGO15525 162 aa11.5□□□□□ -0.57
TMEM248-202ENST00000413593 DTNBO60941 627 aa11.5□□□□□ -0.57
TMEM248-202ENST00000413593 ATP9AO75110 1047 aa11.5□□□□□ -0.57
TMEM248-202ENST00000413593 F2P00734 622 aa11.5□□□□□ -0.57
TMEM248-202ENST00000413593 CD4P01730 458 aa11.5□□□□□ -0.57
TMEM248-202ENST00000413593 ZNF286BP0CG31 522 aa11.5□□□□□ -0.57
TMEM248-202ENST00000413593 KCNA2P16389 499 aa11.5□□□□□ -0.57
TMEM248-202ENST00000413593 ITGB8P26012 769 aa11.5□□□□□ -0.57
TMEM248-202ENST00000413593 BMP8BP34820 402 aa11.5□□□□□ -0.57
TMEM248-202ENST00000413593 NLRP5P59047 1200 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms