RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 GPM6BQ13491 265 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 CCDC158Q5M9N0 1113 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 FAM83BQ5T0W9 1011 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 C6orf118Q5T5N4 469 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 CNKSR3Q6P9H4 555 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 SAMD11Q96NU1 681 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 SLF1Q9BQI6 1058 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 PRKRIP1Q9H875 184 aaPredicted RBP7.66□□□□□ -1.18
LINC00396-201ENST00000411690 GOPCQ9HD26 462 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 PDGFCQ9NRA1 345 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 MCM9Q9NXL9 1143 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 SWAP70Q9UH65 585 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 FBXO40Q9UH90 709 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 SRGAP3O43295 1099 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 MCM3APO60318 1980 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 EFCAB14O75071 495 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 ZBED4O75132 1171 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 IDH1O75874 414 aaKnown RBP7.65□□□□□ -1.18
LINC00396-201ENST00000411690 EEF2P13639 858 aaKnown RBP7.65□□□□□ -1.18
LINC00396-201ENST00000411690 AKR1B1P15121 316 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 VARSP26640 1264 aaKnown RBP7.65□□□□□ -1.18
LINC00396-201ENST00000411690 CACNA1BQ00975 2339 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 IKBKEQ14164 716 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 TMEM63BQ5T3F8 832 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 MCTP2Q6DN12 878 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 NFRKBQ6P4R8 1299 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 KIAA1211Q6ZU35 1233 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.65□□□□□ -1.18
LINC00396-201ENST00000411690 EEPD1Q7L9B9 569 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 CCDC155Q8N6L0 562 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 GPR161Q8N6U8 529 aaKnown RBP7.65□□□□□ -1.18
LINC00396-201ENST00000411690 PRPF38AQ8NAV1 312 aaKnown RBP7.65□□□□□ -1.18
LINC00396-201ENST00000411690 CHST13Q8NET6 341 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 CAGE1Q8TC20 777 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 AFAP1L1Q8TED9 768 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 PPP1R13LQ8WUF5 828 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 RMDN1Q96DB5 314 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 ASIC4Q96FT7 647 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 MTG1Q9BT17 334 aaPredicted RBP7.65□□□□□ -1.18
LINC00396-201ENST00000411690 RAVER2Q9HCJ3 691 aaKnown RBP7.65□□□□□ -1.18
LINC00396-201ENST00000411690 RTN4Q9NQC3 1192 aaKnown RBP7.65□□□□□ -1.18
LINC00396-201ENST00000411690 PIH1D3Q9NQM4 214 aaKnown RBP7.65□□□□□ -1.18
LINC00396-201ENST00000411690 CD207Q9UJ71 328 aa7.65□□□□□ -1.18
LINC00396-201ENST00000411690 TANC1Q9C0D5 1861 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 LOC730098B7Z3J9 87 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 USP17L12C9JPN9 530 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 USP17L21D6R901 530 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 PARNO95453 639 aaKnown RBP7.64□□□□□ -1.19
LINC00396-201ENST00000411690 SELPP16109 830 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 CPT1AP50416 773 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 PTPN11Q06124 597 aaPredicted RBP7.64□□□□□ -1.19
LINC00396-201ENST00000411690 GPNMBQ14956 572 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 PTPRNQ16849 979 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 TAPT1Q6NXT6 567 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 LRRC8DQ7L1W4 858 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 FRMD5Q7Z6J6 570 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 FAM133AQ8N9E0 248 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 DYNLL2Q96FJ2 89 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 CCDC17Q96LX7 622 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 KANSL2Q9H9L4 492 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 EVA1BQ9NVM1 165 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 COG6Q9Y2V7 657 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 TET1Q8NFU7 2136 aa7.64□□□□□ -1.19
LINC00396-201ENST00000411690 NBNO60934 754 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 ZIC2O95409 532 aaPredicted RBP7.63□□□□□ -1.19
LINC00396-201ENST00000411690 CXCL10P02778 98 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 FDX1P10109 184 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 HYAL1Q12794 435 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 G3BP1Q13283 466 aaKnown RBP eCLIP7.63□□□□□ -1.19
LINC00396-201ENST00000411690 PUM1Q14671 1186 aaKnown RBP eCLIP7.63□□□□□ -1.19
LINC00396-201ENST00000411690 CBX2Q14781 532 aaPredicted RBP7.63□□□□□ -1.19
LINC00396-201ENST00000411690 PTGISQ16647 500 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 DUSP28Q4G0W2 176 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 BRDTQ58F21 947 aaPredicted RBP7.63□□□□□ -1.19
LINC00396-201ENST00000411690 FBXO16Q8IX29 292 aaPredicted RBP7.63□□□□□ -1.19
LINC00396-201ENST00000411690 TMEM192Q8IY95 271 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 MYOCDQ8IZQ8 938 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 ITPKCQ96DU7 683 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 RIPOR3Q96MK2 946 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 NUP88Q99567 741 aaPredicted RBP7.63□□□□□ -1.19
LINC00396-201ENST00000411690 RIOK1Q9BRS2 568 aaKnown RBP7.63□□□□□ -1.19
LINC00396-201ENST00000411690 CRNKL1Q9BZJ0 848 aaKnown RBP7.63□□□□□ -1.19
LINC00396-201ENST00000411690 IGFLR1Q9H665 355 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 HOMER2Q9NSB8 354 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 C5orf42Q9H799 3197 aa7.63□□□□□ -1.19
LINC00396-201ENST00000411690 MYO5AQ9Y4I1 1855 aaKnown RBP7.62□□□□□ -1.19
LINC00396-201ENST00000411690 MAGEB6P1A0A0J9YX57 407 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 TBX10O75333 385 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 EYA4O95677 639 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 PDGFBP01127 241 aaPredicted RBP7.62□□□□□ -1.19
LINC00396-201ENST00000411690 AMHP03971 560 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 NR3C2P08235 984 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 CYP2D6P10635 497 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 NDUFV1P49821 464 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 OAZ1P54368 228 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 CHMP4BP1P59074 171 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 HTRA4P83105 476 aaPredicted RBP7.62□□□□□ -1.19
LINC00396-201ENST00000411690 KCNH2Q12809 1159 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 TCTN1Q2MV58 587 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms