RNA–Protein interactions for RNA: ENST00000410411.1

RN7SKP139-201, Transcript of RNA, 7SK small nuclear pseudogene 139, humanhuman

BASIC

Gene RN7SKP139, Length 293 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP139-201ENST00000410411 GAP43P17677 238 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 RPA1P27694 616 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 SREBF1P36956 1147 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 VAV2P52735 878 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 ICA1Q05084 483 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 KLRC3Q07444 240 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 GOLGA8FQ08AF8 430 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 GOLGA8DPQ0D2H9 430 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 MAPK8IP2Q13387 824 aaPredicted RBP9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 MCM6Q14566 821 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 CDC37Q16543 378 aaPredicted RBP9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 IFI16Q16666 785 aaKnown RBP9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 WDR93Q6P2C0 686 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 HDXQ7Z353 690 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 COL23A1Q86Y22 540 aaPredicted RBP9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 C2CD5Q86YS7 1000 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 ZC3H3Q8IXZ2 948 aaKnown RBP9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 RTKN2Q8IZC4 609 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 KIAA0895Q8NCT3 520 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 ALS2CR12Q96Q35 445 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 SLF1Q9BQI6 1058 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 DESI2Q9BSY9 194 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 POLR3CQ9BUI4 534 aaPredicted RBP9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 ANO3Q9BYT9 981 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 SEMA6BQ9H3T3 888 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 NHEJ1Q9H9Q4 299 aaPredicted RBP9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 GOPCQ9HD26 462 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 MAP3K20Q9NYL2 800 aaKnown RBP9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 SEL1LQ9UBV2 794 aa9.43□□□□□ -0.9
RN7SKP139-201ENST00000410411 FRMD3A2A2Y4 597 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 TRIM49BA6NDI0 452 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 PDXKO00764 312 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 PJA2O43164 708 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 CALUO43852 315 aaPredicted RBP9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 ECE2O60344 883 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 TBC1D12O60347 775 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 TDP2O95551 362 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 PLA2G4BP0C869 781 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 IDEP14735 1019 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 ZSCAN20P17040 1043 aaPredicted RBP9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 TCP1P17987 556 aaKnown RBP9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 HSPA1LP34931 641 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 ARHGAP25P42331 645 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 RBM5P52756 815 aaKnown RBP eCLIP9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 PMS1P54277 932 aaKnown RBP9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 ATP2B2Q01814 1243 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 MTF1Q14872 753 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 QRICH1Q2TAL8 776 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 SLC9C1Q4G0N8 1177 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 MIIPQ5JXC2 388 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 SYDE2Q5VT97 1194 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 CC2D1AQ6P1N0 951 aaPredicted RBP9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 WDR59Q6PJI9 974 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 TRAPPC11Q7Z392 1133 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 CACNA2D4Q7Z3S7 1137 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 KRT26Q7Z3Y9 468 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 FRMD5Q7Z6J6 570 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 FAM160B2Q86V87 743 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 SLC35F6Q8N357 371 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 SYT2Q8N9I0 419 aaPredicted RBP9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 CRYGNQ8WXF5 182 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 HAS1Q92839 578 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 ZNF622Q969S3 477 aaKnown RBP eCLIP9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 JAKMIP2Q96AA8 810 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 VTI1AQ96AJ9 217 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 DNAJC19Q96DA6 116 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 CALR3Q96L12 384 aaKnown RBP9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 PARD6BQ9BYG5 372 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 MAF1Q9H063 256 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 DEF6Q9H4E7 631 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 VIPAS39Q9H9C1 493 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 TUFT1Q9NNX1 390 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 SLC39A2Q9NP94 309 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 TMEM260Q9NX78 707 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 CEP72Q9P209 647 aa9.42□□□□□ -0.9
RN7SKP139-201ENST00000410411 UBE4BO95155 1302 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 CCDC66A2RUB6 948 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 SPDYE4A6NLX3 237 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 USP17L10C9JJH3 530 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 F8W031 263 aaPredicted RBP9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 TRAF5O00463 557 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 SLC37A4O43826 429 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 PPP1R12BO60237 982 aaPredicted RBP9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 GFPT2O94808 682 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 APBA3O96018 575 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 SERPING1P05155 500 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 KRT18P05783 430 aaKnown RBP9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 SCNN1DP51172 638 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 ARHGAP4P98171 946 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 COASYQ13057 564 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 NAA30Q147X3 362 aaPredicted RBP9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 SLC15A2Q16348 729 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 NFIL3Q16649 462 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 CCDC40Q4G0X9 1142 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 ZCWPW2Q504Y3 356 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 OGFOD1Q8N543 542 aa9.41□□□□□ -0.9
RN7SKP139-201ENST00000410411 GOLGA5Q8TBA6 731 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms