RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 RAB34Q9BZG1 259 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 COL2A1P02458 1487 aaPredicted RBP11.1□□□□□ -0.63
CUL1-202ENST00000409469 PSMA7O14818 248 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 MSH4O15457 936 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 GYPCP04921 128 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 PSEN1P49768 467 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 FOXD4Q12950 439 aaPredicted RBP11.1□□□□□ -0.63
CUL1-202ENST00000409469 MTMR2Q13614 643 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 KCNB1Q14721 858 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 TNIP1Q15025 636 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 TRMT1LQ7Z2T5 733 aaKnown RBP11.1□□□□□ -0.63
CUL1-202ENST00000409469 CSGALNACT2Q8N6G5 542 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 MTMR14Q8NCE2 650 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 WDR18Q9BV38 432 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 TANGO6Q9C0B7 1094 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 RGL1Q9NZL6 768 aa11.1□□□□□ -0.63
CUL1-202ENST00000409469 BRCA1P38398 1863 aaKnown RBP11.09□□□□□ -0.63
CUL1-202ENST00000409469 B4DLN1 442 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 NFIBO00712 420 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 ZBTB39O15060 712 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 ASNSP08243 561 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 SPIRE1Q08AE8 756 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
CUL1-202ENST00000409469 PDIA5Q14554 519 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 KIF4BQ2VIQ3 1234 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 ANGEL2Q5VTE6 544 aaKnown RBP11.09□□□□□ -0.63
CUL1-202ENST00000409469 LDHDQ86WU2 507 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 BAG1Q99933 345 aaPredicted RBP11.09□□□□□ -0.63
CUL1-202ENST00000409469 SEMA6BQ9H3T3 888 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 EML1O00423 815 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 SREBF1P36956 1147 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 UBXN1Q04323 297 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 TMEM119Q4V9L6 283 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 NYAP1Q6ZVC0 841 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 CATSPER3Q86XQ3 398 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 ABCB11O95342 1321 aa11.09□□□□□ -0.63
CUL1-202ENST00000409469 DDX39AO00148 427 aaKnown RBP11.08□□□□□ -0.64
CUL1-202ENST00000409469 FANCGO15287 622 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 GCFC2P16383 781 aaKnown RBP11.08□□□□□ -0.64
CUL1-202ENST00000409469 PBX1P40424 430 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 USP11P51784 963 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 AP3B2Q13367 1082 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 SYT10Q6XYQ8 523 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 NELFCDQ8IXH7 590 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 P2RX5Q93086 422 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 CUEDC2Q9H467 287 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 RAVER2Q9HCJ3 691 aaKnown RBP11.08□□□□□ -0.64
CUL1-202ENST00000409469 COL20A1Q9P218 1284 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.08□□□□□ -0.64
CUL1-202ENST00000409469 V9GYY5 206 aaPredicted RBP11.08□□□□□ -0.64
CUL1-202ENST00000409469 ZNF280AP59817 542 aaPredicted RBP11.08□□□□□ -0.64
CUL1-202ENST00000409469 FKBP1CQ5VVH2 108 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 RINLQ6ZS11 566 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 MYRIPQ8NFW9 859 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 HOOK2Q96ED9 719 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 RANBP17Q9H2T7 1088 aaKnown RBP11.08□□□□□ -0.64
CUL1-202ENST00000409469 CCPG1Q9ULG6 757 aa11.08□□□□□ -0.64
CUL1-202ENST00000409469 ZNF536O15090 1300 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 TBC1D12O60347 775 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 PEX10O60683 326 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 PLA2G4BP0C869 781 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 ALAS1P13196 640 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 EPS15P42566 896 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 AMPD3Q01432 767 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 SPP2Q13103 211 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 ORC2Q13416 577 aaPredicted RBP11.07□□□□□ -0.64
CUL1-202ENST00000409469 STIM1Q13586 685 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 CTTNQ14247 550 aaKnown RBP11.07□□□□□ -0.64
CUL1-202ENST00000409469 FILIP1LQ4L180 1135 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 DNAJC14Q6Y2X3 702 aaPredicted RBP11.07□□□□□ -0.64
CUL1-202ENST00000409469 GPBP1Q86WP2 473 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 IL31RAQ8NI17 732 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 PIGOQ8TEQ8 1089 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 DNAJC19Q96DA6 116 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 IRX2Q9BZI1 471 aaPredicted RBP11.07□□□□□ -0.64
CUL1-202ENST00000409469 STK17AQ9UEE5 414 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 LIMA1Q9UHB6 759 aaKnown RBP11.07□□□□□ -0.64
CUL1-202ENST00000409469 IGLV3-22A0A075B6J6 115 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 AKR1B15C9JRZ8 316 aaPredicted RBP11.07□□□□□ -0.64
CUL1-202ENST00000409469 FZD9O00144 591 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 FLOT1O75955 427 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 COASYQ13057 564 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 MUM1L1Q5H9M0 696 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 ARHGAP27Q6ZUM4 889 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 PPFIBP1Q86W92 1011 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 CNOT6LQ96LI5 555 aaKnown RBP11.07□□□□□ -0.64
CUL1-202ENST00000409469 WRNIP1Q96S55 665 aa11.07□□□□□ -0.64
CUL1-202ENST00000409469 CYP3A7-CYP3A51PA0A087WV96 503 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 SFI1A8K8P3 1242 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 RSPH10B2B2RC85 870 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 GCOM1H8Y6P7 765 aaPredicted RBP11.06□□□□□ -0.64
CUL1-202ENST00000409469 RSPH10BP0C881 870 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 POLR2MP0CAP2 368 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 SPATA31C1P0DKV0 1188 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 ARP10275 920 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 CYP3A7P24462 503 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 CASP5P51878 434 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 ARSHQ5FYA8 562 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 CNNM4Q6P4Q7 775 aa11.06□□□□□ -0.64
CUL1-202ENST00000409469 RAD9BQ6WBX8 426 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms