RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 GH1P01241 217 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 MMP1P03956 469 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 UBA1P22314 1058 aaKnown RBP23.15■■□□□ 1.3
PTCD3-202ENST00000409326 FOSBP53539 338 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 ARHGAP1Q07960 439 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 CUL4AQ13619 759 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 FSCN1Q16658 493 aaKnown RBP23.15■■□□□ 1.3
PTCD3-202ENST00000409326 GNASQ5JWF2 1037 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 KRT40Q6A162 431 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 PCSK9Q8NBP7 692 aaKnown RBP23.15■■□□□ 1.3
PTCD3-202ENST00000409326 SNX21Q969T3 373 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 CDHR1Q96JP9 859 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 C8orf76Q96K31 380 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 MXRA8Q9BRK3 442 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 BRMS1Q9HCU9 246 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 PHF24Q9UPV7 400 aa23.15■■□□□ 1.3
PTCD3-202ENST00000409326 DNAH12Q6ZR08 3092 aa23.14■■□□□ 1.3
PTCD3-202ENST00000409326 MOXD2PA6NHM9 499 aa23.14■■□□□ 1.29
PTCD3-202ENST00000409326 KRT2P35908 639 aa23.14■■□□□ 1.29
PTCD3-202ENST00000409326 BEX3Q00994 111 aa23.14■■□□□ 1.29
PTCD3-202ENST00000409326 SP2Q02086 613 aa23.14■■□□□ 1.29
PTCD3-202ENST00000409326 MTMR1Q13613 665 aa23.14■■□□□ 1.29
PTCD3-202ENST00000409326 KCNA10Q16322 511 aa23.14■■□□□ 1.29
PTCD3-202ENST00000409326 CEP55Q53EZ4 464 aa23.14■■□□□ 1.29
PTCD3-202ENST00000409326 KRT25Q7Z3Z0 450 aa23.14■■□□□ 1.29
PTCD3-202ENST00000409326 OXER1Q8TDS5 423 aa23.14■■□□□ 1.29
PTCD3-202ENST00000409326 EMID1Q96A84 441 aaPredicted RBP23.14■■□□□ 1.29
PTCD3-202ENST00000409326 KIF3AQ9Y496 699 aa23.14■■□□□ 1.29
PTCD3-202ENST00000409326 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.14■■□□□ 1.29
PTCD3-202ENST00000409326 MAFGO15525 162 aa23.13■■□□□ 1.29
PTCD3-202ENST00000409326 CPT1AP50416 773 aa23.13■■□□□ 1.29
PTCD3-202ENST00000409326 NIPA1Q7RTP0 329 aa23.13■■□□□ 1.29
PTCD3-202ENST00000409326 K7ELQ4 463 aaPredicted RBP23.12■■□□□ 1.29
PTCD3-202ENST00000409326 ZEB2O60315 1214 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 GGPS1O95749 300 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 ASGR1P07306 291 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 CIITAP33076 1130 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 ZNF76P36508 570 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 ACLYP53396 1101 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 LAMC2Q13753 1193 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 NEDD9Q14511 834 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 NONOQ15233 471 aaKnown RBP eCLIP23.12■■□□□ 1.29
PTCD3-202ENST00000409326 CELF3Q5SZQ8 465 aaKnown RBP23.12■■□□□ 1.29
PTCD3-202ENST00000409326 DHX37Q8IY37 1157 aaKnown RBP23.12■■□□□ 1.29
PTCD3-202ENST00000409326 CYP2W1Q8TAV3 490 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 TBCKQ8TEA7 893 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 SENP7Q9BQF6 1050 aa23.12■■□□□ 1.29
PTCD3-202ENST00000409326 SENP6Q9GZR1 1112 aaPredicted RBP23.12■■□□□ 1.29
PTCD3-202ENST00000409326 TNRC18O15417 2968 aaPredicted RBP23.11■■□□□ 1.29
PTCD3-202ENST00000409326 SCN10AQ9Y5Y9 1956 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 CCDC194A0A1B0GVG4 234 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 A6NJR5 290 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 FAM86B1E9PN63 330 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 MEIS1O00470 390 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 FAM86B2P0C5J1 330 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 GJB2P29033 226 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 USP11P51784 963 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 BRDTQ58F21 947 aaPredicted RBP23.11■■□□□ 1.29
PTCD3-202ENST00000409326 MYSM1Q5VVJ2 828 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 DIS3L2Q8IYB7 885 aaKnown RBP23.11■■□□□ 1.29
PTCD3-202ENST00000409326 FBXO18Q8NFZ0 1043 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 TNFRSF25Q93038 417 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 KCNH7Q9NS40 1196 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 SMC3Q9UQE7 1217 aa23.11■■□□□ 1.29
PTCD3-202ENST00000409326 IGLV3-22A0A075B6J6 115 aa23.1■■□□□ 1.29
PTCD3-202ENST00000409326 A0A1W2PQ45 241 aaPredicted RBP23.1■■□□□ 1.29
PTCD3-202ENST00000409326 A0A1W2PQY0 241 aa23.1■■□□□ 1.29
PTCD3-202ENST00000409326 EDIL3O43854 480 aa23.1■■□□□ 1.29
PTCD3-202ENST00000409326 KCNA2P16389 499 aa23.1■■□□□ 1.29
PTCD3-202ENST00000409326 GUCY1B3Q02153 619 aa23.1■■□□□ 1.29
PTCD3-202ENST00000409326 NR5A1Q13285 461 aa23.1■■□□□ 1.29
PTCD3-202ENST00000409326 SAFBQ15424 915 aaKnown RBP eCLIP23.1■■□□□ 1.29
PTCD3-202ENST00000409326 GIMAP8Q8ND71 665 aaPredicted RBP23.1■■□□□ 1.29
PTCD3-202ENST00000409326 PPTC7Q8NI37 304 aa23.1■■□□□ 1.29
PTCD3-202ENST00000409326 AFG1LQ8WV93 481 aa23.1■■□□□ 1.29
PTCD3-202ENST00000409326 BTBD18B2RXH4 712 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 ATP9AO75110 1047 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 MMP3P08254 477 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 SETQ01105 290 aaPredicted RBP23.09■■□□□ 1.29
PTCD3-202ENST00000409326 MLLT1Q03111 559 aaPredicted RBP23.09■■□□□ 1.29
PTCD3-202ENST00000409326 INF2Q27J81 1249 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 METTL7BQ6UX53 244 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 PIK3AP1Q6ZUJ8 805 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 PLA2G4DQ86XP0 818 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 HSCBQ8IWL3 235 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 FERMT2Q96AC1 680 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 HTATIP2Q9BUP3 242 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 MLXIPQ9HAP2 919 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 POLR3EQ9NVU0 708 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 PDE4DIPQ5VU43 2346 aa23.09■■□□□ 1.29
PTCD3-202ENST00000409326 CABYRO75952 493 aa23.08■■□□□ 1.29
PTCD3-202ENST00000409326 ARP10275 920 aa23.08■■□□□ 1.29
PTCD3-202ENST00000409326 EARS2Q5JPH6 523 aaKnown RBP23.08■■□□□ 1.29
PTCD3-202ENST00000409326 MOXD1Q6UVY6 613 aa23.08■■□□□ 1.29
PTCD3-202ENST00000409326 CXCL17Q6UXB2 119 aa23.08■■□□□ 1.29
PTCD3-202ENST00000409326 CYFIP1Q7L576 1253 aa23.08■■□□□ 1.29
PTCD3-202ENST00000409326 GLT1D1Q96MS3 346 aa23.08■■□□□ 1.29
PTCD3-202ENST00000409326 SPATA33Q96N06 139 aa23.08■■□□□ 1.29
PTCD3-202ENST00000409326 BCAS3Q9H6U6 928 aa23.08■■□□□ 1.29
PTCD3-202ENST00000409326 AGO4Q9HCK5 861 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms