RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CUL9Q8IWT3 2517 aa11.16□□□□□ -0.62
NIF3L1-202ENST00000409020 PNMA6FA0A0J9YX94 578 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 A6NJR5 290 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 CABYRO75952 493 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 NR3C2P08235 984 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 CYP2C9P11712 490 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 MCM5P33992 734 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 CPT1AP50416 773 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 CCL23P55773 120 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 TTLL4Q14679 1199 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 STXBP2Q15833 593 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 CASC1Q6TDU7 716 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 SRBD1Q8N5C6 995 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 AFG1LQ8WV93 481 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 VWCEQ96DN2 955 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 RNPC3Q96LT9 517 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 GUCD1Q96NT3 240 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 PDCD2LQ9BRP1 358 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 WNT8AQ9H1J5 351 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 ALDH8A1Q9H2A2 487 aaPredicted RBP11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 BCAS3Q9H6U6 928 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 MTMR10Q9NXD2 777 aa11.15□□□□□ -0.62
NIF3L1-202ENST00000409020 ZEB2O60315 1214 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 DDAH1O94760 285 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 MYCLP12524 364 aaPredicted RBP11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 CPA1P15085 419 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 CHMP4BP1P59074 171 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 SP2Q02086 613 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 GPR153Q6NV75 609 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 NFXL1Q6ZNB6 911 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 FCHSD1Q86WN1 690 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 CCDC82Q8N4S0 544 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 IWS1Q96ST2 819 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 MPHOSPH6Q99547 160 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 MTG1Q9BT17 334 aaPredicted RBP11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 NOC4LQ9BVI4 516 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 DDX41Q9UJV9 622 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 TLR3O15455 904 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 CDC45O75419 566 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 EIF3JO75822 258 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 MMP3P08254 477 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 PGM5Q15124 567 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 TMEM240Q5SV17 173 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 CTCFLQ8NI51 663 aaPredicted RBP11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 KAT2BQ92831 832 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 SCLYQ96I15 445 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 TTYH1Q9H313 450 aaPredicted RBP11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 HIPK3Q9H422 1215 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 POLR3EQ9NVU0 708 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 TELO2Q9Y4R8 837 aa11.14□□□□□ -0.63
NIF3L1-202ENST00000409020 SCN10AQ9Y5Y9 1956 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 CCDC69A6NI79 296 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 GRXCR1A8MXD5 290 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 GCOM1H8Y6P7 765 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 NKRFO15226 690 aaKnown RBP eCLIP11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 OFD1O75665 1012 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 POLR2MP0CAP2 368 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 LIFRP42702 1097 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 FAM47CQ5HY64 1035 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 USP17L6PQ6QN14 398 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 ZNF365Q70YC5 407 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 MICU3Q86XE3 530 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 TMEM87BQ96K49 555 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 SPZ1Q9BXG8 430 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 CXXC1Q9P0U4 656 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 MRVI1Q9Y6F6 885 aa11.13□□□□□ -0.63
NIF3L1-202ENST00000409020 DYNC1I1O14576 645 aa11.12□□□□□ -0.63
NIF3L1-202ENST00000409020 GH1P01241 217 aa11.12□□□□□ -0.63
NIF3L1-202ENST00000409020 ZNF286BP0CG31 522 aa11.12□□□□□ -0.63
NIF3L1-202ENST00000409020 PBX2P40425 430 aa11.12□□□□□ -0.63
NIF3L1-202ENST00000409020 MRPS9P82933 396 aaKnown RBP11.12□□□□□ -0.63
NIF3L1-202ENST00000409020 EXOSC10Q01780 885 aaKnown RBP11.12□□□□□ -0.63
NIF3L1-202ENST00000409020 CTAGE1Q96RT6 745 aa11.12□□□□□ -0.63
NIF3L1-202ENST00000409020 MAP3K14Q99558 947 aa11.12□□□□□ -0.63
NIF3L1-202ENST00000409020 MAF1Q9H063 256 aa11.12□□□□□ -0.63
NIF3L1-202ENST00000409020 KIAA1217Q5T5P2 1943 aa11.12□□□□□ -0.63
NIF3L1-202ENST00000409020 FSD2A1L4K1 749 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 B4DLN1 442 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 MEIS2O14770 477 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 UBA1P22314 1058 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 MRPL12P52815 198 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 SEMA3FQ13275 785 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 HSDL1Q3SXM5 330 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 RASIP1Q5U651 963 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 TMTC3Q6ZXV5 915 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 EGFL6Q8IUX8 553 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 TMEM199Q8N511 208 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 RRP36Q96EU6 259 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 NEK1Q96PY6 1258 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 SLC12A7Q9Y666 1083 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 FRMPD4Q14CM0 1322 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 GGPS1O95749 300 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 KIF5BP33176 963 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 SMAD3P84022 425 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 PPIGQ13427 754 aaKnown RBP eCLIP11.11□□□□□ -0.631e-6■■■■□ 25.5
NIF3L1-202ENST00000409020 HIC1Q14526 733 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 UBE2SQ16763 222 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms