RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TEKT2Q9UIF3 430 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 LRRD1A4D1F6 860 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 GYG1P46976 350 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 BCAMP50895 628 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 CYP4A11Q02928 519 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 RASIP1Q5U651 963 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 LRRC4Q9HBW1 653 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 TMEM247A6NEH6 219 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 SEMA3EO15041 775 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 PAMP19021 973 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 NOP14P78316 857 aaKnown RBP13.04□□□□□ -0.32
SMCR8-201ENST00000406438 SLFN13Q68D06 897 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 NACC1Q96RE7 527 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 CHL1O00533 1208 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 EEF1B2P24534 225 aaKnown RBP13.04□□□□□ -0.32
SMCR8-201ENST00000406438 ARL13BQ3SXY8 428 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 FAM26FQ5R3K3 315 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 CCDC197Q8NCU1 140 aa13.04□□□□□ -0.32
SMCR8-201ENST00000406438 ABCC12Q96J65 1359 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 MAP2P11137 1827 aaKnown RBP13.03□□□□□ -0.32
SMCR8-201ENST00000406438 LRRN2O75325 713 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 USP14P54578 494 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 TAB3Q8N5C8 712 aaPredicted RBP13.03□□□□□ -0.32
SMCR8-201ENST00000406438 ACCSQ96QU6 501 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 TMEM206Q9H813 350 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 ZNF804BA4D1E1 1349 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 CSPG5O95196 566 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 AFPP02771 609 aaKnown RBP13.03□□□□□ -0.32
SMCR8-201ENST00000406438 SUPT20HL1Q3ZLR7 823 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 FBXL13Q8NEE6 735 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 LARP4BQ92615 738 aaKnown RBP13.03□□□□□ -0.32
SMCR8-201ENST00000406438 LMBRD1Q9NUN5 540 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 HSPD1P10809 573 aaKnown RBP13.03□□□□□ -0.32
SMCR8-201ENST00000406438 DNAJC10Q8IXB1 793 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 SEPT8Q92599 483 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 NUDCD1Q96RS6 583 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 TRIM15Q9C019 465 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 FOXP1Q9H334 677 aaPredicted RBP13.03□□□□□ -0.32
SMCR8-201ENST00000406438 FGAP02671 866 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 TFAMQ00059 246 aaKnown RBP13.03□□□□□ -0.32
SMCR8-201ENST00000406438 NAA35Q5VZE5 725 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 DARS2Q6PI48 645 aaKnown RBP13.03□□□□□ -0.32
SMCR8-201ENST00000406438 FAM149B1Q96BN6 582 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 ZNF653Q96CK0 615 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 NDUFAF2Q8N183 169 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 CCDC17Q96LX7 622 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 SERPINI1Q99574 410 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 CARD14Q9BXL6 1004 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 SYNMO15061 1565 aa13.03□□□□□ -0.32
SMCR8-201ENST00000406438 MAP3K7O43318 606 aa13.02□□□□□ -0.32
SMCR8-201ENST00000406438 BZW1Q7L1Q6 419 aaKnown RBP13.02□□□□□ -0.32
SMCR8-201ENST00000406438 MAGED2Q9UNF1 606 aaPredicted RBP13.02□□□□□ -0.32
SMCR8-201ENST00000406438 XDHP47989 1333 aa13.02□□□□□ -0.32
SMCR8-201ENST00000406438 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.32
SMCR8-201ENST00000406438 CHEK2O96017 543 aa13.02□□□□□ -0.32
SMCR8-201ENST00000406438 GOLGA8HP0CJ92 632 aa13.02□□□□□ -0.32
SMCR8-201ENST00000406438 PCGF5Q86SE9 256 aa13.02□□□□□ -0.32
SMCR8-201ENST00000406438 GANCQ8TET4 914 aa13.02□□□□□ -0.32
SMCR8-201ENST00000406438 DHTKD1Q96HY7 919 aaPredicted RBP13.02□□□□□ -0.32
SMCR8-201ENST00000406438 TUBB6Q9BUF5 446 aa13.02□□□□□ -0.32
SMCR8-201ENST00000406438 PFKFB2O60825 505 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 FAM135BQ49AJ0 1406 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 CARMIL3Q8ND23 1372 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 COPB1P53618 953 aaKnown RBP13.02□□□□□ -0.33
SMCR8-201ENST00000406438 FRA10AC1Q70Z53 315 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 KCTD1Q719H9 257 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 DHX38Q92620 1227 aaKnown RBP13.02□□□□□ -0.33
SMCR8-201ENST00000406438 ITM2BQ9Y287 266 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 DAAM1Q9Y4D1 1078 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 DNAJC24Q6P3W2 148 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 SPICE1Q8N0Z3 855 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 WDR11Q9BZH6 1224 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 PCDHA4Q9UN74 947 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 SOX5P35711 763 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 ARHGDIAP52565 204 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 SNX1Q13596 522 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 ATG16L1Q676U5 607 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 CALN1Q9BXU9 219 aa13.02□□□□□ -0.33
SMCR8-201ENST00000406438 STK25O00506 426 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 PRPSAP2O60256 369 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 TRAPPC10P48553 1259 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 PPP4R4Q6NUP7 873 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 C7orf31Q8N865 590 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 HSPA2P54652 639 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 POLR3CQ9BUI4 534 aaPredicted RBP13.01□□□□□ -0.33
SMCR8-201ENST00000406438 TXLNGQ9NUQ3 528 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 KIAA0232Q92628 1395 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 NPR1P16066 1061 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 SURF1Q15526 300 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 CROCC2H7BZ55 1655 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 EPHB1P54762 984 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 ARMCX2Q7L311 632 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 SIX6OS1Q8N1H7 587 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 GCFC2P16383 781 aaKnown RBP13.01□□□□□ -0.33
SMCR8-201ENST00000406438 GLE1Q53GS7 698 aaKnown RBP13.01□□□□□ -0.33
SMCR8-201ENST00000406438 TEX12Q9BXU0 123 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 SUDS3Q9H7L9 328 aaPredicted RBP13.01□□□□□ -0.33
SMCR8-201ENST00000406438 H3BRJ5 948 aa13.01□□□□□ -0.33
SMCR8-201ENST00000406438 DEUP1Q05D60 604 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms