RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 ENOX2Q16206 610 aaKnown RBP17.13■□□□□ 0.33
ATG4B-205ENST00000404914 UAP1Q16222 522 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-205ENST00000404914 EMC10Q5UCC4 262 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 DYMQ7RTS9 669 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 CYFIP2Q96F07 1278 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 INPP4AQ96PE3 977 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-205ENST00000404914 OSBPL7Q9BZF2 842 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 NEUROG2Q9H2A3 272 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 TECP42680 631 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 ERVK-9P63128 1117 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 MREGQ8N565 214 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 C7orf25Q9BPX7 421 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
ATG4B-205ENST00000404914 TSPY2A6NKD2 308 aa17.12■□□□□ 0.33
ATG4B-205ENST00000404914 FAM107AO95990 144 aa17.12■□□□□ 0.33
ATG4B-205ENST00000404914 MMP14P50281 582 aa17.12■□□□□ 0.33
ATG4B-205ENST00000404914 CD302Q8IX05 232 aa17.12■□□□□ 0.33
ATG4B-205ENST00000404914 DCP1AQ9NPI6 582 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-205ENST00000404914 CNOT8Q9UFF9 292 aaKnown RBP17.12■□□□□ 0.33
ATG4B-205ENST00000404914 NHSQ6T4R5 1651 aa17.12■□□□□ 0.33
ATG4B-205ENST00000404914 DCDC2CA8MYV0 355 aa17.12■□□□□ 0.33
ATG4B-205ENST00000404914 MYL1P05976 194 aa17.12■□□□□ 0.33
ATG4B-205ENST00000404914 LETM2Q2VYF4 491 aa17.12■□□□□ 0.33
ATG4B-205ENST00000404914 GLE1Q53GS7 698 aaKnown RBP17.12■□□□□ 0.33
ATG4B-205ENST00000404914 YTHDF3Q7Z739 585 aaKnown RBP17.12■□□□□ 0.33
ATG4B-205ENST00000404914 TMBIM4Q9HC24 238 aa17.12■□□□□ 0.33
ATG4B-205ENST00000404914 MYMKA6NI61 221 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 CCDC172P0C7W6 258 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 KLRK1P26718 216 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 FLT3P36888 993 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 SMTNP53814 917 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 BYSLQ13895 437 aaKnown RBP17.11■□□□□ 0.33
ATG4B-205ENST00000404914 MAN2A1Q16706 1144 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
ATG4B-205ENST00000404914 SUFUQ9UMX1 484 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 NOL4O94818 638 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 GOLGA8HP0CJ92 632 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 ARID5AQ03989 594 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 LRRC55Q6ZSA7 311 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 FAM212AQ96EL1 285 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 JAG2Q9Y219 1238 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 ZNF804BA4D1E1 1349 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 H0YGN5 161 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 OPLAHO14841 1288 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 ORC4O43929 436 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 ATP2C2O75185 946 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 HSD17B3P37058 310 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-205ENST00000404914 A1CFQ9NQ94 594 aaKnown RBP17.11■□□□□ 0.33
ATG4B-205ENST00000404914 BLOC1S4Q9NUP1 217 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 NFS1Q9Y697 457 aa17.11■□□□□ 0.33
ATG4B-205ENST00000404914 MYH4Q9Y623 1939 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 STXBP3O00186 592 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 CCNT1O60563 726 aaKnown RBP17.1■□□□□ 0.33
ATG4B-205ENST00000404914 SCP2P22307 547 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 HSPA9P38646 679 aaKnown RBP17.1■□□□□ 0.33
ATG4B-205ENST00000404914 IGHMBP2P38935 993 aaKnown RBP17.1■□□□□ 0.33
ATG4B-205ENST00000404914 CACNA2D4Q7Z3S7 1137 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 HAUS2Q9NVX0 235 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 SLC12A6Q9UHW9 1150 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 MAD2L2Q9UI95 211 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 MCM8Q9UJA3 840 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 A6NNZ2 444 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 CHUKO15111 745 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 ECM2O94769 699 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-205ENST00000404914 TRIM37O94972 964 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 USP17L8P0C7I0 530 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 SF3A3Q12874 501 aaKnown RBP eCLIP17.1■□□□□ 0.339e-7■■■□□ 19.2
ATG4B-205ENST00000404914 HLTFQ14527 1009 aaKnown RBP eCLIP17.1■□□□□ 0.33
ATG4B-205ENST00000404914 TUBB8Q3ZCM7 444 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 MICALCLQ6ZW33 695 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 SPATS2Q86XZ4 545 aaKnown RBP17.1■□□□□ 0.33
ATG4B-205ENST00000404914 PNMA1Q8ND90 353 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 TBC1D5Q92609 795 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 DYNLL2Q96FJ2 89 aa17.1■□□□□ 0.33
ATG4B-205ENST00000404914 A0A087X0T9 212 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 GRID2IPA4D2P6 1211 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 USP17L3A6NCW0 530 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 USP17L4A6NCW7 530 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 OR52Z1P0C646 297 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 FAM228BP0C875 321 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 SETQ01105 290 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-205ENST00000404914 MEI1Q5TIA1 1274 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 USP17L1Q7RTZ2 530 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 TANGO6Q9C0B7 1094 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 TCP11L1Q9NUJ3 509 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 CASZ1Q86V15 1759 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 HMGB1P1B2RPK0 211 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-205ENST00000404914 MYBP10242 640 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 ZNF844Q08AG5 666 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 GRB10Q13322 594 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 PREPLQ4J6C6 727 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-205ENST00000404914 TMED8Q6PL24 325 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-205ENST00000404914 C3orf67Q6ZVT6 689 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 DONSONQ9NYP3 566 aa17.09■□□□□ 0.33
ATG4B-205ENST00000404914 BCCIPQ9P287 314 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATG4B-205ENST00000404914 TFAP4Q01664 338 aa17.08■□□□□ 0.33
ATG4B-205ENST00000404914 NAB2Q15742 525 aa17.08■□□□□ 0.33
ATG4B-205ENST00000404914 USP38Q8NB14 1042 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms