RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 WDR66Q8TBY9 1149 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 RPGRIP1Q96KN7 1286 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 CCDC43Q96MW1 224 aaKnown RBP13.24□□□□□ -0.29
RBM39-206ENST00000403542 RTFDC1Q9BY42 306 aaPredicted RBP13.24□□□□□ -0.29
RBM39-206ENST00000403542 TSPYL1Q9H0U9 437 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 BCAS3Q9H6U6 928 aa13.24□□□□□ -0.29
RBM39-206ENST00000403542 RIMBP2O15034 1052 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 TMEM266Q2M3C6 531 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 MFSD14BQ5SR56 506 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 DPP8Q6V1X1 898 aaPredicted RBP13.23□□□□□ -0.29
RBM39-206ENST00000403542 LRRC55Q6ZSA7 311 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 FNBP4Q8N3X1 1017 aaPredicted RBP13.23□□□□□ -0.29
RBM39-206ENST00000403542 NOX5Q96PH1 765 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 MXD3Q9BW11 206 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 CUEDC2Q9H467 287 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 KIAA1024Q9UPX6 916 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 FAM196BA6NMK8 535 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 MEIS1O00470 390 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 HEXIM1O94992 359 aaKnown RBP13.23□□□□□ -0.29
RBM39-206ENST00000403542 ADCY7P51828 1080 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 KIAA0753Q2KHM9 967 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 HERC4Q5GLZ8 1057 aaPredicted RBP13.23□□□□□ -0.29
RBM39-206ENST00000403542 FAM83BQ5T0W9 1011 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 GALNT17Q6IS24 598 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 USP17L6PQ6QN14 398 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 RAD54LQ92698 747 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
RBM39-206ENST00000403542 ZIM3Q96PE6 472 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 SPZ1Q9BXG8 430 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 PHLPP1O60346 1717 aa13.23□□□□□ -0.29
RBM39-206ENST00000403542 A0A087X0T9 212 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
RBM39-206ENST00000403542 FAM228BP0C875 321 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 PDHBP11177 359 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 AKR1B1P15121 316 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 EPS15P42566 896 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 SF3A3Q12874 501 aaKnown RBP eCLIP13.22□□□□□ -0.294e-10■■■□□ 14.6
RBM39-206ENST00000403542 PDXDC1Q6P996 788 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 SLC30A10Q6XR72 485 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 CCDC84Q86UT8 332 aaPredicted RBP13.22□□□□□ -0.29
RBM39-206ENST00000403542 MYOCDQ8IZQ8 938 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 MTMR9Q96QG7 549 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 A0A1W2PQJ5 194 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 POTEB3A0JP26 581 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 POTECB2RU33 542 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 HSF2BPO75031 334 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 HPDP32754 393 aaPredicted RBP13.22□□□□□ -0.29
RBM39-206ENST00000403542 GPSM2P81274 684 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 GUCY1A3Q02108 690 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 COASYQ13057 564 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 SHROOM1Q2M3G4 852 aaPredicted RBP13.22□□□□□ -0.29
RBM39-206ENST00000403542 TTC31Q49AM3 519 aaPredicted RBP13.22□□□□□ -0.29
RBM39-206ENST00000403542 HGSNATQ68CP4 663 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 POTEBQ6S5H4 581 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 PANK4Q9NVE7 773 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 TCP1P17987 556 aaKnown RBP13.22□□□□□ -0.29
RBM39-206ENST00000403542 NOP2P46087 812 aaKnown RBP13.22□□□□□ -0.29
RBM39-206ENST00000403542 HLTFQ14527 1009 aaKnown RBP eCLIP13.22□□□□□ -0.296e-21■□□□□ 9.2
RBM39-206ENST00000403542 SLC10A5Q5PT55 438 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 SFMBT2Q5VUG0 894 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 DDX42Q86XP3 938 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■□□□□ 9.8
RBM39-206ENST00000403542 MMGT1Q8N4V1 131 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 MSL3Q8N5Y2 521 aaKnown RBP13.22□□□□□ -0.29
RBM39-206ENST00000403542 ANKS1AQ92625 1134 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 TSG101Q99816 390 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 DDX25Q9UHL0 483 aaKnown RBP13.22□□□□□ -0.29
RBM39-206ENST00000403542 NARFQ9UHQ1 456 aa13.22□□□□□ -0.29
RBM39-206ENST00000403542 C6orf229H3BNL8 230 aa13.21□□□□□ -0.29
RBM39-206ENST00000403542 PPP1R11O60927 126 aaPredicted RBP13.21□□□□□ -0.29
RBM39-206ENST00000403542 NOL4O94818 638 aa13.21□□□□□ -0.29
RBM39-206ENST00000403542 CORO7P57737 925 aa13.21□□□□□ -0.29
RBM39-206ENST00000403542 FAM26FQ5R3K3 315 aa13.21□□□□□ -0.29
RBM39-206ENST00000403542 GUF1Q8N442 669 aaKnown RBP13.21□□□□□ -0.29
RBM39-206ENST00000403542 OR2W6PQ8NHA6 318 aa13.21□□□□□ -0.29
RBM39-206ENST00000403542 NEDD1Q8NHV4 660 aa13.21□□□□□ -0.29
RBM39-206ENST00000403542 AP1M1Q9BXS5 423 aa13.21□□□□□ -0.29
RBM39-206ENST00000403542 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.29
RBM39-206ENST00000403542 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.21□□□□□ -0.29
RBM39-206ENST00000403542 COL4A3BPQ9Y5P4 624 aa13.21□□□□□ -0.29
RBM39-206ENST00000403542 BACH1O14867 736 aa13.21□□□□□ -0.3
RBM39-206ENST00000403542 MAGEA9P43362 315 aa13.21□□□□□ -0.3
RBM39-206ENST00000403542 NNTQ13423 1086 aa13.21□□□□□ -0.3
RBM39-206ENST00000403542 SLC9C1Q4G0N8 1177 aa13.21□□□□□ -0.3
RBM39-206ENST00000403542 ZNF804AQ7Z570 1209 aa13.21□□□□□ -0.3
RBM39-206ENST00000403542 USP17L10C9JJH3 530 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 KCNK3O14649 394 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 RPS6KA5O75582 802 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 SCNN1DP51172 638 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 GSTO1P78417 241 aa13.2□□□□□ -0.3
RBM39-206ENST00000403542 KLHL30Q0D2K2 578 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms