RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 PLA2G4BP0C869 781 aa18.84■□□□□ 0.61
DNMT3A-205ENST00000402667 STAT3P40763 770 aa18.84■□□□□ 0.61
DNMT3A-205ENST00000402667 FAM26FQ5R3K3 315 aa18.84■□□□□ 0.61
DNMT3A-205ENST00000402667 FOXR2Q6PJQ5 311 aa18.84■□□□□ 0.61
DNMT3A-205ENST00000402667 KRT222Q8N1A0 295 aa18.84■□□□□ 0.61
DNMT3A-205ENST00000402667 SUPT20HQ8NEM7 779 aa18.84■□□□□ 0.61
DNMT3A-205ENST00000402667 TSG101Q99816 390 aa18.84■□□□□ 0.61
DNMT3A-205ENST00000402667 ZSWIM4Q9H7M6 989 aa18.84■□□□□ 0.61
DNMT3A-205ENST00000402667 SLC26A4O43511 780 aa18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 CHMP4BP1P59074 171 aa18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 BMS1Q14692 1282 aaKnown RBP18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 PRR16Q569H4 304 aa18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 MCTP2Q6DN12 878 aa18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 TMCO3Q6UWJ1 677 aa18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 CEP112Q8N8E3 955 aa18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 ETNPPLQ8TBG4 499 aa18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 NHEJ1Q9H9Q4 299 aaPredicted RBP18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 PUF60Q9UHX1 559 aaKnown RBP18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 SIK3Q9Y2K2 1263 aa18.83■□□□□ 0.61
DNMT3A-205ENST00000402667 MED24O75448 989 aa18.83■□□□□ 0.6
DNMT3A-205ENST00000402667 ZRANB2O95218 330 aaKnown RBP eCLIP18.83■□□□□ 0.6
DNMT3A-205ENST00000402667 ZSCAN20P17040 1043 aaPredicted RBP18.83■□□□□ 0.6
DNMT3A-205ENST00000402667 CYLC1P35663 651 aaPredicted RBP18.83■□□□□ 0.6
DNMT3A-205ENST00000402667 MMP14P50281 582 aa18.83■□□□□ 0.6
DNMT3A-205ENST00000402667 KRT83P78385 493 aa18.83■□□□□ 0.6
DNMT3A-205ENST00000402667 ZCWPW2Q504Y3 356 aa18.83■□□□□ 0.6
DNMT3A-205ENST00000402667 BTNL9Q6UXG8 535 aa18.83■□□□□ 0.6
DNMT3A-205ENST00000402667 IQCDQ96DY2 449 aa18.83■□□□□ 0.6
DNMT3A-205ENST00000402667 FHOD1Q9Y613 1164 aa18.83■□□□□ 0.6
DNMT3A-205ENST00000402667 C21orf2O43822 256 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 TAL1P17542 331 aaPredicted RBP18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 CDK17Q00537 523 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 SPIRE1Q08AE8 756 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 CCDC170Q8IYT3 715 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 FGFBP2Q9BYJ0 223 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 TFR2Q9UP52 801 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 NPHP3-ACAD11A0A0J9YXS1 232 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 SPDYE3A6NKU9 549 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 FOSP01100 380 aaPredicted RBP18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 Q4G0T1 1027 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 ZNF662Q6ZS27 426 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 GPBP1Q86WP2 473 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 CCDC65Q8IXS2 484 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 LENG9Q96B70 501 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 PARD6BQ9BYG5 372 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 TBC1D7Q9P0N9 293 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 PCDHA2Q9Y5H9 948 aa18.82■□□□□ 0.6
DNMT3A-205ENST00000402667 EIF3CLB5ME19 914 aaKnown RBP18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 OPLAHO14841 1288 aa18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 TBX3O15119 743 aa18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 EPHB6O15197 1021 aa18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 CYP11B2P19099 503 aa18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 SREBF1P36956 1147 aa18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 CCDC122Q5T0U0 273 aa18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 SPICE1Q8N0Z3 855 aa18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 EIF3CQ99613 913 aaKnown RBP18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 COL2A1P02458 1487 aaPredicted RBP18.81■□□□□ 0.6
DNMT3A-205ENST00000402667 TCP10L2B9ZVM9 353 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 FAM86B1E9PN63 330 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 TFRCP02786 760 aaKnown RBP18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 FAM86B2P0C5J1 330 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 FKBP3Q00688 224 aaKnown RBP18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 CCDC84Q86UT8 332 aaPredicted RBP18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 CATSPER3Q86XQ3 398 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 FAM207AQ9NSI2 230 aaPredicted RBP18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 HERC5Q9UII4 1024 aaKnown RBP18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 PRR12Q9ULL5 1215 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 POTEFA5A3E0 1075 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 POTEIP0CG38 1075 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 PNMA6AP0CW24 399 aaPredicted RBP18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 ERCC3P19447 782 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 HNRNPH3P31942 346 aaKnown RBP18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 SLC12A3P55017 1021 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 AMPD2Q01433 879 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 HERC4Q5GLZ8 1057 aaPredicted RBP18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 HAUS3Q68CZ6 603 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 POTEGQ6S5H5 508 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 POTEEQ6S8J3 1075 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 KIAA1328Q86T90 577 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 MMRN2Q9H8L6 949 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 PLAGL2Q9UPG8 496 aa18.8■□□□□ 0.6
DNMT3A-205ENST00000402667 TRAF5O00463 557 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 PSMD14O00487 310 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 RXRBP28702 533 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 HOXA13P31271 388 aaPredicted RBP18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 ECE1P42892 770 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 ARSHQ5FYA8 562 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 JAKMIP2Q96AA8 810 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 TMOD2Q9NZR1 351 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 SYNPO2Q9UMS6 1093 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 CLRN2A0PK11 232 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 RCCD1A6NED2 376 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 SPDYE2BA6NHP3 402 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 SEC31AO94979 1220 aaKnown RBP18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 IPO7O95373 1038 aaKnown RBP18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 SPDYE6P0CI01 402 aa18.79■□□□□ 0.6
DNMT3A-205ENST00000402667 CIITAP33076 1130 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms