RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 LMNB1P20700 586 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 GARSP41250 739 aaKnown RBP14.94□□□□□ -0.02
VAPA-202ENST00000400000 RASSF2P50749 326 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 SLC7A5Q01650 507 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 CCDC38Q502W7 563 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 CPVLQ9H3G5 476 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 HYOU1Q9Y4L1 999 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 GSTA4O15217 222 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 GPC4O75487 556 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 TTLL1O95922 423 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 TUBB4BP68371 445 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 CERS3Q8IU89 383 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 SEPT12Q8IYM1 358 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 FLAD1Q8NFF5 587 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 PSPC1Q8WXF1 523 aaKnown RBP14.94□□□□□ -0.02
VAPA-202ENST00000400000 SLC7A3Q8WY07 619 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 IWS1Q96ST2 819 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 GDAQ9Y2T3 454 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 CPP00450 1065 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 NR5A1Q13285 461 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 AOC3Q16853 763 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 TMEM259Q4ZIN3 620 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 LRRC8CQ8TDW0 803 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 PPWD1Q96BP3 646 aaKnown RBP14.94□□□□□ -0.02
VAPA-202ENST00000400000 USP44Q9H0E7 712 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 SYNDIG1Q9H7V2 258 aa14.94□□□□□ -0.02
VAPA-202ENST00000400000 RBL2Q08999 1139 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 TEX2Q8IWB9 1127 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.93□□□□□ -0.02
VAPA-202ENST00000400000 HEXIM1O94992 359 aaKnown RBP14.93□□□□□ -0.02
VAPA-202ENST00000400000 MFAP3P55082 362 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 PIGOQ8TEQ8 1089 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 NT5C1BQ96P26 610 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 ZCWPW1Q9H0M4 648 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 PDIA3P30101 505 aaKnown RBP14.93□□□□□ -0.02
VAPA-202ENST00000400000 ELF1P32519 619 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 ZNF772Q68DY9 489 aaPredicted RBP14.93□□□□□ -0.02
VAPA-202ENST00000400000 TRIM58Q8NG06 486 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 PI4K2BG5E9Z4 385 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 CFLARO15519 480 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 TRPA1O75762 1119 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 PHEXP78562 749 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 THOC5Q13769 683 aaKnown RBP14.93□□□□□ -0.02
VAPA-202ENST00000400000 RPGRIP1Q96KN7 1286 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 LRRC4Q9HBW1 653 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 LARSQ9P2J5 1176 aaKnown RBP14.93□□□□□ -0.02
VAPA-202ENST00000400000 MMP10P09238 476 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 CACNB2Q08289 660 aaPredicted RBP14.93□□□□□ -0.02
VAPA-202ENST00000400000 ASPHQ12797 758 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 SUPT20HL1Q3ZLR7 823 aa14.93□□□□□ -0.02
VAPA-202ENST00000400000 LIG3P49916 1009 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 GBP5Q96PP8 586 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 AP1M1Q9BXS5 423 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 POLR3EQ9NVU0 708 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 SUGT1Q9Y2Z0 365 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 ARHGAP4P98171 946 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 UNC5CLQ8IV45 518 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 KRT82Q9NSB4 513 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 TSKSQ9UJT2 592 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 MYO1FO00160 1098 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 NCF2P19878 526 aaPredicted RBP14.92□□□□□ -0.02
VAPA-202ENST00000400000 ATP8A1Q9Y2Q0 1164 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 ANXA13P27216 316 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 PSMD2Q13200 908 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 PPP2R5EQ16537 467 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 DEPDC1BQ8WUY9 529 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 AMNQ9BXJ7 453 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 WDR62O43379 1518 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 PFDN6O15212 129 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 COPB1P53618 953 aaKnown RBP14.92□□□□□ -0.02
VAPA-202ENST00000400000 C10orf76Q5T2E6 689 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 PDXDC2PQ6P474 469 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 TRMT10CQ7L0Y3 403 aaKnown RBP14.92□□□□□ -0.02
VAPA-202ENST00000400000 SCN4BQ8IWT1 228 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 OR6B3Q8NGW1 331 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 SARS2Q9NP81 518 aaKnown RBP14.92□□□□□ -0.02
VAPA-202ENST00000400000 CPSF2Q9P2I0 782 aaKnown RBP14.92□□□□□ -0.02
VAPA-202ENST00000400000 PIK3R2O00459 728 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 PLTPP55058 493 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 HVCN1Q96D96 273 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 TUBGCP2Q9BSJ2 902 aa14.92□□□□□ -0.02
VAPA-202ENST00000400000 EIF2AK4Q9P2K8 1649 aaKnown RBP14.91□□□□□ -0.02
VAPA-202ENST00000400000 FAM133BQ5BKY9 247 aaKnown RBP14.91□□□□□ -0.02
VAPA-202ENST00000400000 SYDE2Q5VT97 1194 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 C1orf228Q6PIY5 440 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 AIFM3Q96NN9 605 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 GCNT4Q9P109 453 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 SNAP23O00161 211 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 SGO2Q562F6 1265 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 TCP11X2Q5H9J9 407 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 SPOPLQ6IQ16 392 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 ARHGEF18Q6ZSZ5 1173 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 KRT26Q7Z3Y9 468 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 RAB44Q7Z6P3 723 aaPredicted RBP14.91□□□□□ -0.02
VAPA-202ENST00000400000 FAM186BQ8IYM0 893 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 RNF139Q8WU17 664 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 LARP4BQ92615 738 aaKnown RBP14.91□□□□□ -0.02
VAPA-202ENST00000400000 GOLGA8MH3BSY2 632 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 MGEA5O60502 916 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 POLR2BP30876 1174 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms