RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CD3EP07766 207 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 CANXP27824 592 aaKnown RBP4.18□□□□□ -1.74
CD47-203ENST00000398258 DGCR2P98153 550 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 RASA3Q14644 834 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 DDR2Q16832 855 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 CWF19L1Q69YN2 538 aaKnown RBP4.18□□□□□ -1.74
CD47-203ENST00000398258 WWC2Q6AWC2 1192 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 FAM124AQ86V42 546 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 FIBCD1Q8N539 461 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 PMFBP1Q8TBY8 1022 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 HNRNPLLQ8WVV9 542 aaKnown RBP4.18□□□□□ -1.74
CD47-203ENST00000398258 YTHDC1Q96MU7 727 aaKnown RBP4.18□□□□□ -1.74
CD47-203ENST00000398258 ZSWIM4Q9H7M6 989 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 GP6Q9HCN6 339 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 FAM86C1Q9NVL1 165 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 ACTR10Q9NZ32 417 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 CDK11AQ9UQ88 783 aaPredicted RBP4.18□□□□□ -1.74
CD47-203ENST00000398258 TBX22Q9Y458 520 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 SLC12A7Q9Y666 1083 aa4.18□□□□□ -1.74
CD47-203ENST00000398258 TLDC2A0PJX2 215 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 C9orf118A6NHY6 69 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 TBC1D8O95759 1140 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 NTRK1P04629 796 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 PPP2CBP62714 309 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 PPP2CAP67775 309 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 FXNQ16595 210 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 CD300LDQ6UXZ3 194 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 MIB1Q86YT6 1006 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 CCDC144CPQ8IYA2 1237 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 CELF2-AS1Q8N7Q2 184 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 ZNF669Q96BR6 464 aaPredicted RBP4.17□□□□□ -1.74
CD47-203ENST00000398258 TCAF1Q9Y4C2 921 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 ZNF451Q9Y4E5 1061 aa4.17□□□□□ -1.74
CD47-203ENST00000398258 WDR33Q9C0J8 1336 aaKnown RBP4.17□□□□□ -1.74
CD47-203ENST00000398258 SGSM2O43147 1006 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 ZBTB7AO95365 584 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 STAT5AP42229 794 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 MLLT6P55198 1093 aaPredicted RBP4.16□□□□□ -1.74
CD47-203ENST00000398258 DPTQ07507 201 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 RASGRF1Q13972 1273 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 SURF1Q15526 300 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 PPP2R5EQ16537 467 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 ETV3LQ6ZN32 361 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 UNC5AQ6ZN44 842 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 RNF207Q6ZRF8 634 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 CPNE8Q86YQ8 564 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 TTLL6Q8N841 843 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 JMYQ8N9B5 988 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 USP33Q8TEY7 942 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 ZCCHC14Q8WYQ9 949 aaKnown RBP4.16□□□□□ -1.74
CD47-203ENST00000398258 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 TRIM55Q9BYV6 548 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 PHAXQ9H814 394 aaKnown RBP4.16□□□□□ -1.74
CD47-203ENST00000398258 SNTG2Q9NY99 539 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 FHOD1Q9Y613 1164 aa4.16□□□□□ -1.74
CD47-203ENST00000398258 U2SURPO15042 1029 aaKnown RBP4.15□□□□□ -1.75
CD47-203ENST00000398258 FOXS1O43638 330 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 ZNF202O95125 648 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 TP53P04637 393 aaPredicted RBP4.15□□□□□ -1.75
CD47-203ENST00000398258 BMS1Q14692 1282 aaKnown RBP4.15□□□□□ -1.75
CD47-203ENST00000398258 CR1LQ2VPA4 569 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 CABP7Q86V35 215 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 KBTBD2Q8IY47 623 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 FAM177A1Q8N128 213 aaPredicted RBP4.15□□□□□ -1.75
CD47-203ENST00000398258 PLEKHO2Q8TD55 490 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 MICAL1Q8TDZ2 1067 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 MRFAP1L1Q96HT8 127 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 ZSWIM3Q96MP5 696 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 ZDHHC15Q96MV8 337 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 DEPDC7Q96QD5 511 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 TRIM8Q9BZR9 551 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 NOL6Q9H6R4 1146 aaKnown RBP4.15□□□□□ -1.75
CD47-203ENST00000398258 NUDT5Q9UKK9 219 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 ZNF214Q9UL59 606 aaPredicted RBP4.15□□□□□ -1.75
CD47-203ENST00000398258 PCDHB10Q9UN67 800 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 ZFR2Q9UPR6 939 aaKnown RBP4.15□□□□□ -1.75
CD47-203ENST00000398258 WASF3Q9UPY6 502 aa4.15□□□□□ -1.75
CD47-203ENST00000398258 R3HCC1Q9Y3T6 440 aaKnown RBP4.15□□□□□ -1.75
CD47-203ENST00000398258 FAM221BA6H8Z2 402 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 STXBP3O00186 592 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 AURKAO14965 403 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 CD247P20963 164 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 IL12RB1P42701 662 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 NOP2P46087 812 aaKnown RBP4.14□□□□□ -1.75
CD47-203ENST00000398258 PMS1P54277 932 aaKnown RBP4.14□□□□□ -1.75
CD47-203ENST00000398258 NCAPHQ15003 741 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 ANKRD39Q53RE8 183 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 SLFN13Q68D06 897 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 MBLAC2Q68D91 279 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 RCSD1Q6JBY9 416 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 PCSK4Q6UW60 755 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 PLEKHH3Q7Z736 793 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 JAZF1Q86VZ6 243 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 AMER2Q8N7J2 671 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 ST13P5Q8NFI4 369 aaPredicted RBP4.14□□□□□ -1.75
CD47-203ENST00000398258 DHRS1Q96LJ7 313 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 GNRHR2Q96P88 292 aa4.14□□□□□ -1.75
CD47-203ENST00000398258 TMA7Q9Y2S6 64 aaKnown RBP4.14□□□□□ -1.75
CD47-203ENST00000398258 ENPP3O14638 875 aa4.13□□□□□ -1.75
CD47-203ENST00000398258 PDPK1O15530 556 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms