RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 MASTLQ96GX5 879 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CCDC17Q96LX7 622 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 ZDHHC15Q96MV8 337 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 FUT8Q9BYC5 575 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 EHD4Q9H223 541 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 MMRN2Q9H8L6 949 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 FAM198AQ9UFP1 575 aa20.37■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CCDC151A5D8V7 595 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 SRGAP2O75044 1071 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 LONRF2Q1L5Z9 754 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CCDC155Q8N6L0 562 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 FGFBP2Q9BYJ0 223 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 PSMD14O00487 310 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 POLR3GO15318 223 aaPredicted RBP20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 COASYQ13057 564 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 SEPT2Q15019 361 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CDC37Q16543 378 aaPredicted RBP20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 SLFN13Q68D06 897 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 LRRC55Q6ZSA7 311 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 PODNQ7Z5L7 613 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 KIAA1024Q9UPX6 916 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 SIK3Q9Y2K2 1263 aa20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 GREB1LQ9C091 1923 aaPredicted RBP20.36■□□□□ 0.85
CHRFAM7A-202ENST00000397827 IPO7O95373 1038 aaKnown RBP20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 GDF11O95390 407 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 NPHP3-ACAD11A0A0J9YXS1 232 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 EIF3CLB5ME19 914 aaKnown RBP20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 ZNF263O14978 683 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 ATP8B1O43520 1251 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 KRT86O43790 486 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 STAT3P40763 770 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 LRRC63Q05C16 580 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 MAN2A1Q16706 1144 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 FIGNQ5HY92 759 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 C2CD5Q86YS7 1000 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 SIAH1Q8IUQ4 282 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 EIF3CQ99613 913 aaKnown RBP20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 COL11A2P13942 1736 aaPredicted RBP20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 NRXN2Q9P2S2 1712 aa20.35■□□□□ 0.85
CHRFAM7A-202ENST00000397827 A0A1W2PQJ5 194 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 POTEB3A0JP26 581 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 MACROD2A1Z1Q3 448 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 POTECB2RU33 542 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 MYCNP04198 464 aaPredicted RBP20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 TAL1P17542 331 aaPredicted RBP20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 POTEBQ6S5H4 581 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 TRAPPC11Q7Z392 1133 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CCDC170Q8IYT3 715 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 ZCCHC17Q9NP64 241 aaKnown RBP20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 PANK4Q9NVE7 773 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 PI4KBQ9UBF8 816 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 ARFGEF1Q9Y6D6 1849 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 GCFC2P16383 781 aaKnown RBP20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 BRD3Q15059 726 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 MYOCDQ8IZQ8 938 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 MSANTD4Q8NCY6 345 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CCDC42Q96M95 316 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 P2RX7Q99572 595 aaKnown RBP20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 ANO3Q9BYT9 981 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 MYO1CO00159 1063 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 TANGO6Q9C0B7 1094 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 LRRC27Q9C0I9 530 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 KANSL2Q9H9L4 492 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 SUGCTQ9HAC7 445 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 ARHGAP20Q9P2F6 1191 aa20.34■□□□□ 0.85
CHRFAM7A-202ENST00000397827 C10orf71Q711Q0 1435 aa20.33■□□□□ 0.85
CHRFAM7A-202ENST00000397827 AKT1S1Q96B36 256 aa20.33■□□□□ 0.85
CHRFAM7A-202ENST00000397827 CAPZA3Q96KX2 299 aa20.33■□□□□ 0.85
CHRFAM7A-202ENST00000397827 DHX36Q9H2U1 1008 aaKnown RBP20.33■□□□□ 0.85
CHRFAM7A-202ENST00000397827 LCMT1Q9UIC8 334 aa20.33■□□□□ 0.85
CHRFAM7A-202ENST00000397827 PLAGL2Q9UPG8 496 aa20.33■□□□□ 0.85
CHRFAM7A-202ENST00000397827 SIPA1L1O43166 1804 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 VSNL1P62760 191 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ICA1Q05084 483 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 PSMD2Q13200 908 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 SMC1AQ14683 1233 aaKnown RBP20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 USH1GQ495M9 461 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 FAM26FQ5R3K3 315 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 DACT2Q5SW24 774 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ICE2Q659A1 982 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 NELFCDQ8IXH7 590 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 MKL1Q969V6 931 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 SAR1BQ9Y6B6 198 aa20.33■□□□□ 0.84
CHRFAM7A-202ENST00000397827 SCN9AQ15858 1988 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 TRAF5O00463 557 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 MEIS2O14770 477 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 ECE2O60344 883 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 FGFR1OPO95684 399 aaKnown RBP20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 TXLNBQ8N3L3 684 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 SMCR8Q8TEV9 937 aaPredicted RBP20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 TSG101Q99816 390 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 NYAP2Q9P242 653 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 RAB21Q9UL25 225 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 F5H6K3 240 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 PLA2G4BP0C869 781 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 KLRC3Q07444 240 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 MUM1L1Q5H9M0 696 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 BEND6Q5SZJ8 279 aaPredicted RBP20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 RRAGAQ7L523 313 aa20.32■□□□□ 0.84
CHRFAM7A-202ENST00000397827 NT5C3AQ9H0P0 336 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms