RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PRRC2BQ5JSZ5 2229 aaKnown RBP10.27□□□□□ -0.76
CAPN3-208ENST00000397204 RNF40O75150 1001 aa10.27□□□□□ -0.77
CAPN3-208ENST00000397204 IQCF3P0C7M6 154 aa10.27□□□□□ -0.77
CAPN3-208ENST00000397204 HSPD1P10809 573 aaKnown RBP10.27□□□□□ -0.77
CAPN3-208ENST00000397204 NT5C2P49902 561 aa10.27□□□□□ -0.77
CAPN3-208ENST00000397204 PDE1AP54750 535 aa10.27□□□□□ -0.77
CAPN3-208ENST00000397204 CCDC178Q5BJE1 867 aa10.27□□□□□ -0.77
CAPN3-208ENST00000397204 GPATCH4Q5T3I0 446 aaKnown RBP10.27□□□□□ -0.77
CAPN3-208ENST00000397204 FTOQ9C0B1 505 aaKnown RBP eCLIP10.27□□□□□ -0.77
CAPN3-208ENST00000397204 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
CAPN3-208ENST00000397204 COG5Q9UP83 839 aa10.27□□□□□ -0.77
CAPN3-208ENST00000397204 NOD1Q9Y239 953 aa10.27□□□□□ -0.77
CAPN3-208ENST00000397204 MTCH2Q9Y6C9 303 aa10.27□□□□□ -0.77
CAPN3-208ENST00000397204 FRMPD2Q68DX3 1309 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-208ENST00000397204 BAIAP3O94812 1187 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 PARNO95453 639 aaKnown RBP10.26□□□□□ -0.77
CAPN3-208ENST00000397204 CA3P07451 260 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 SWT1Q5T5J6 900 aaKnown RBP10.26□□□□□ -0.77
CAPN3-208ENST00000397204 CCDC62Q6P9F0 684 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 SLC30A10Q6XR72 485 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 DGKHQ86XP1 1220 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 HERC6Q8IVU3 1022 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 MICALL1Q8N3F8 863 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 CCDC155Q8N6L0 562 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 FAM227BQ96M60 508 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 IWS1Q96ST2 819 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 C1QTNF1Q9BXJ1 281 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 RNF41Q9H4P4 317 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-208ENST00000397204 ZMYM6O95789 1325 aa10.26□□□□□ -0.77
CAPN3-208ENST00000397204 RFXAPO00287 272 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 CASTP20810 708 aaKnown RBP10.25□□□□□ -0.77
CAPN3-208ENST00000397204 MFAP1P55081 439 aaKnown RBP10.25□□□□□ -0.77
CAPN3-208ENST00000397204 TAP1Q03518 808 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 SKIV2LQ15477 1246 aaKnown RBP10.25□□□□□ -0.77
CAPN3-208ENST00000397204 STXBP2Q15833 593 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 PTGISQ16647 500 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 SESTD1Q86VW0 696 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 MCF2L2Q86YR7 1114 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 CAGE1Q8TC20 777 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 NSUN6Q8TEA1 469 aaKnown RBP10.25□□□□□ -0.77
CAPN3-208ENST00000397204 AFAP1L1Q8TED9 768 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 ESR2Q92731 530 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 COPS5Q92905 334 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 LMCD1Q9NZU5 365 aa10.25□□□□□ -0.77
CAPN3-208ENST00000397204 PIEZO1Q92508 2521 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 A0A0D9SFI3 127 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 ARIH2O95376 493 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 GH1P01241 217 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 TFF2Q03403 129 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 AFG1LQ8WV93 481 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 ARNTL2Q8WYA1 636 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 ANKS1AQ92625 1134 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 HLA-CQ95604 372 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 UBA5Q9GZZ9 404 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 CERS4Q9HA82 394 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 ABCB11O95342 1321 aa10.24□□□□□ -0.77
CAPN3-208ENST00000397204 ZNF213O14771 459 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 TLL1O43897 1013 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 EFCAB14O75071 495 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 EIF3JO75822 258 aaKnown RBP10.23□□□□□ -0.77
CAPN3-208ENST00000397204 GOLGA8HP0CJ92 632 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 SELPP16109 830 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 KCNJ6P48051 423 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 KCNQ1P51787 676 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 HAND2P61296 217 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 ARHGAP1Q07960 439 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 RBL2Q08999 1139 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 NMIQ13287 307 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-208ENST00000397204 HDAC1Q13547 482 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-208ENST00000397204 LAMC2Q13753 1193 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 DGKDQ16760 1214 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 LY6KQ17RY6 165 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 USH1GQ495M9 461 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 GDF6Q6KF10 455 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-208ENST00000397204 SEPT14Q6ZU15 432 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 ZNF589Q86UQ0 364 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-208ENST00000397204 IQCA1Q86XH1 822 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 ADGRF4Q8IZF3 695 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 PNMA1Q8ND90 353 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 SYTL5Q8TDW5 730 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-208ENST00000397204 TBC1D5Q92609 795 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 KAT2BQ92831 832 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 TAAR1Q96RJ0 339 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 RMDN3Q96TC7 470 aa10.23□□□□□ -0.77
CAPN3-208ENST00000397204 MRPL11Q9Y3B7 192 aaKnown RBP10.23□□□□□ -0.77
CAPN3-208ENST00000397204 ABHD14A-ACY1A0A1B0GW23 586 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 RCCD1A6NED2 376 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 EPOPA6NHQ4 379 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 PPFIA4O75335 1185 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 CXCL10P02778 98 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 MMP3P08254 477 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 CHMP4BP1P59074 171 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 GRB10Q13322 594 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 GPNMBQ14956 572 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 CNKSR3Q6P9H4 555 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 LRRC8DQ7L1W4 858 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 FBXO11Q86XK2 927 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 C7orf31Q8N865 590 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 PPP1R13LQ8WUF5 828 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 EMID1Q96A84 441 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms