RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 COL9A3Q14050 684 aaPredicted RBP16.01■□□□□ 0.15
SEC13-204ENST00000397099 NBPF20Q3BBV1 942 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 MYSM1Q5VVJ2 828 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 PSRC1Q6PGN9 363 aaPredicted RBP16.01■□□□□ 0.15
SEC13-204ENST00000397099 USP17L6PQ6QN14 398 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 RUFY3Q7L099 469 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 RPUSD2Q8IZ73 545 aaKnown RBP16.01■□□□□ 0.15
SEC13-204ENST00000397099 CMTR1Q8N1G2 835 aaKnown RBP16.01■□□□□ 0.15
SEC13-204ENST00000397099 CCDC82Q8N4S0 544 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 TCEANC2Q96MN5 208 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 GUCD1Q96NT3 240 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 SENP7Q9BQF6 1050 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 USP26Q9BXU7 913 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 MTIF3Q9H2K0 278 aaKnown RBP16.01■□□□□ 0.15
SEC13-204ENST00000397099 MLXIPQ9HAP2 919 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 CYP46A1Q9Y6A2 500 aa16.01■□□□□ 0.15
SEC13-204ENST00000397099 SPATA31C2B4DYI2 1134 aa16■□□□□ 0.15
SEC13-204ENST00000397099 B4GALT4O60513 344 aa16■□□□□ 0.15
SEC13-204ENST00000397099 RGS20O76081 388 aa16■□□□□ 0.15
SEC13-204ENST00000397099 PFKMP08237 780 aa16■□□□□ 0.15
SEC13-204ENST00000397099 EVCP57679 992 aa16■□□□□ 0.15
SEC13-204ENST00000397099 FUT2Q10981 343 aa16■□□□□ 0.15
SEC13-204ENST00000397099 CCDC155Q8N6L0 562 aa16■□□□□ 0.15
SEC13-204ENST00000397099 BRF1Q92994 677 aa16■□□□□ 0.15
SEC13-204ENST00000397099 GPRASP2Q96D09 838 aa16■□□□□ 0.15
SEC13-204ENST00000397099 SPATA33Q96N06 139 aa16■□□□□ 0.15
SEC13-204ENST00000397099 BUD13Q9BRD0 619 aaKnown RBP eCLIP16■□□□□ 0.157e-14■■■□□ 15.6
SEC13-204ENST00000397099 TRPV6Q9H1D0 765 aa16■□□□□ 0.15
SEC13-204ENST00000397099 ZSWIM6Q9HCJ5 1215 aa16■□□□□ 0.15
SEC13-204ENST00000397099 BARHL2Q9NY43 387 aa16■□□□□ 0.15
SEC13-204ENST00000397099 NAP1L2Q9ULW6 460 aaPredicted RBP16■□□□□ 0.15
SEC13-204ENST00000397099 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 GGPS1O95749 300 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 F2P00734 622 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 ACRP10323 421 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 UBA1P22314 1058 aaKnown RBP15.99■□□□□ 0.15
SEC13-204ENST00000397099 RFC2P35250 354 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 NAPAP54920 295 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 MRPS9P82933 396 aaKnown RBP15.99■□□□□ 0.15
SEC13-204ENST00000397099 AKAP17AQ02040 695 aaKnown RBP15.99■□□□□ 0.15
SEC13-204ENST00000397099 AP3B2Q13367 1082 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 BFSP2Q13515 415 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 FAM47CQ5HY64 1035 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 METTL7BQ6UX53 244 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 RAB11FIP4Q86YS3 637 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 IL31RAQ8NI17 732 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 SEMA6BQ9H3T3 888 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 RIC8AQ9NPQ8 531 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 NOD1Q9Y239 953 aa15.99■□□□□ 0.15
SEC13-204ENST00000397099 V9GY48 417 aaPredicted RBP15.99■□□□□ 0.15
SEC13-204ENST00000397099 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.98■□□□□ 0.15
SEC13-204ENST00000397099 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.98■□□□□ 0.15
SEC13-204ENST00000397099 NOP56O00567 594 aaKnown RBP15.98■□□□□ 0.15
SEC13-204ENST00000397099 PARNO95453 639 aaKnown RBP15.98■□□□□ 0.15
SEC13-204ENST00000397099 ADCY7P51828 1080 aa15.98■□□□□ 0.15
SEC13-204ENST00000397099 CHMP4BP1P59074 171 aa15.98■□□□□ 0.15
SEC13-204ENST00000397099 ANAPC15P60006 121 aa15.98■□□□□ 0.15
SEC13-204ENST00000397099 APOBRQ0VD83 1088 aa15.98■□□□□ 0.15
SEC13-204ENST00000397099 PFKFB3Q16875 520 aaPredicted RBP15.98■□□□□ 0.15
SEC13-204ENST00000397099 TMEM240Q5SV17 173 aa15.98■□□□□ 0.15
SEC13-204ENST00000397099 WWC2Q6AWC2 1192 aa15.98■□□□□ 0.15
SEC13-204ENST00000397099 C7orf31Q8N865 590 aa15.98■□□□□ 0.15
SEC13-204ENST00000397099 CAGE1Q8TC20 777 aa15.98■□□□□ 0.15
SEC13-204ENST00000397099 CDX2Q99626 313 aaPredicted RBP15.98■□□□□ 0.15
SEC13-204ENST00000397099 NOC4LQ9BVI4 516 aaKnown RBP15.98■□□□□ 0.15
SEC13-204ENST00000397099 IL23AQ9NPF7 189 aa15.98■□□□□ 0.15
SEC13-204ENST00000397099 PRPF3O43395 683 aaKnown RBP15.97■□□□□ 0.15
SEC13-204ENST00000397099 SCG2P13521 617 aa15.97■□□□□ 0.15
SEC13-204ENST00000397099 CCL23P55773 120 aa15.97■□□□□ 0.15
SEC13-204ENST00000397099 ZNF365Q70YC5 407 aa15.97■□□□□ 0.15
SEC13-204ENST00000397099 FAM177A1Q8N128 213 aaPredicted RBP15.97■□□□□ 0.15
SEC13-204ENST00000397099 RETREG2Q8NC44 543 aa15.97■□□□□ 0.15
SEC13-204ENST00000397099 BICD2Q8TD16 824 aa15.97■□□□□ 0.15
SEC13-204ENST00000397099 ZNF274Q96GC6 653 aaPredicted RBP15.97■□□□□ 0.15
SEC13-204ENST00000397099 FAM217BQ9NTX9 383 aaPredicted RBP15.97■□□□□ 0.15
SEC13-204ENST00000397099 TRMT13Q9NUP7 481 aaKnown RBP15.97■□□□□ 0.15
SEC13-204ENST00000397099 PCDHA6Q9UN73 950 aa15.97■□□□□ 0.15
SEC13-204ENST00000397099 PCDHA8Q9Y5H6 950 aa15.97■□□□□ 0.15
SEC13-204ENST00000397099 TMEM265A0A087WTH1 108 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 hCG_1642624A0A1W2PR95 340 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 ESYT2A0FGR8 921 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 SMCO2A6NFE2 343 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 STXBP3O00186 592 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 IFNAR1P17181 557 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 DNAJB2P25686 324 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 GNA11P29992 359 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 CDC27P30260 824 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 ADD1P35611 737 aaKnown RBP15.96■□□□□ 0.15
SEC13-204ENST00000397099 PSEN2P49810 448 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 SP2Q02086 613 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 HSDL1Q3SXM5 330 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 CPLX2Q6PUV4 134 aaKnown RBP15.96■□□□□ 0.15
SEC13-204ENST00000397099 C16orf59Q7L2K0 433 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 KAT2BQ92831 832 aa15.96■□□□□ 0.15
SEC13-204ENST00000397099 GPKOWQ92917 476 aaPredicted RBP eCLIP15.96■□□□□ 0.159e-7■□□□□ 8.5
SEC13-204ENST00000397099 RNF26Q9BY78 433 aaPredicted RBP15.96■□□□□ 0.15
SEC13-204ENST00000397099 TTYH1Q9H313 450 aaPredicted RBP15.96■□□□□ 0.15
SEC13-204ENST00000397099 ZNF215Q9UL58 517 aaPredicted RBP15.96■□□□□ 0.15
SEC13-204ENST00000397099 UMODL1Q5DID0 1318 aa15.95■□□□□ 0.14
SEC13-204ENST00000397099 HAS3O00219 553 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms