RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 USP19O94966 1318 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 HIP1RO75146 1068 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 DDAH1O94760 285 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 ASNSP08243 561 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 USP17L8P0C7I0 530 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 PCP11498 1178 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 ACCSLQ4AC99 568 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 LRRC31Q6UY01 552 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 TRIM67Q6ZTA4 783 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 BANK1Q8NDB2 785 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 RAET1EQ8TD07 263 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 TEKT4Q8WW24 435 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 EDEM3Q9BZQ6 932 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 RNF181Q9P0P0 153 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 FBXO40Q9UH90 709 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 KIF14Q15058 1648 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 MAP3K15Q6ZN16 1313 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 BASP1P80723 227 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 MORC3Q14149 939 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 MFSD14CQ5VZR4 134 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 THNSL1Q8IYQ7 743 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 URGCPQ8TCY9 931 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 EXOC4Q96A65 974 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 MAGOHBQ96A72 148 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 ASIC4Q96FT7 647 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 TACO1Q9BSH4 297 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 CPSF2Q9P2I0 782 aaKnown RBP7.79□□□□□ -1.16
UPF2-203ENST00000397053 STK17AQ9UEE5 414 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 TNNQ9UQP3 1299 aa7.79□□□□□ -1.16
UPF2-203ENST00000397053 OPHN1O60890 802 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 TCP1P17987 556 aaKnown RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 PSMC2P35998 433 aaKnown RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 SLC16A2P36021 539 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 KCNJ6P48051 423 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 WASHC5Q12768 1159 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 VEPH1Q14D04 833 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 MUM1Q2TAK8 710 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 ZNF467Q7Z7K2 595 aaPredicted RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 FAM160B2Q86V87 743 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 TMEM206Q9H813 350 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 MRPL47Q9HD33 250 aaKnown RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 NGRNQ9NPE2 291 aaKnown RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 IMPACTQ9P2X3 320 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 EPS15L1Q9UBC2 864 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 USP17L3A6NCW0 530 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 USP17L4A6NCW7 530 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 BTBD18B2RXH4 712 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 GTPBP6O43824 516 aaPredicted RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 GCFC2P16383 781 aaKnown RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 ARHGDIAP52565 204 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 CLNS1AP54105 237 aaKnown RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 DYNLT1P63172 113 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 PNOCQ13519 176 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 ZBTB41Q5SVQ8 909 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 DARS2Q6PI48 645 aaKnown RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 USP17L1Q7RTZ2 530 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 TADA2BQ86TJ2 420 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 ANKRD13CQ8N6S4 541 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 DHX38Q92620 1227 aaKnown RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 EEF2KMTQ96G04 330 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 GBP5Q96PP8 586 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 EFHD1Q9BUP0 239 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 TEKT2Q9UIF3 430 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 AOX1Q06278 1338 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 C21orf2O43822 256 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 PDE8BO95263 885 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 ARL4DP49703 201 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 OCRLQ01968 901 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 TCP11X2Q5H9J9 407 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 OTUD7AQ8TE49 926 aaPredicted RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 PCIF1Q9H4Z3 704 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 ZNF212Q9UDV6 495 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 DOLKQ9UPQ8 538 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 CHL1O00533 1208 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 BLVRAP53004 296 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 EIF4A1P60842 406 aaKnown RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 YWHAHQ04917 246 aaPredicted RBP7.78□□□□□ -1.16
UPF2-203ENST00000397053 PTGDRQ13258 359 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 KLC3Q6P597 504 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 TRAIPQ9BWF2 469 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 COG4Q9H9E3 785 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 MID2Q9UJV3 735 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
UPF2-203ENST00000397053 ASXL2Q76L83 1435 aa7.77□□□□□ -1.16
UPF2-203ENST00000397053 YEATS2Q9ULM3 1422 aa7.77□□□□□ -1.16
UPF2-203ENST00000397053 LRRD1A4D1F6 860 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 LRRN2O75325 713 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 APOEP02649 317 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 KRT1P04264 644 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 RLBP1P12271 317 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 GLE1Q53GS7 698 aaKnown RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 TTC19Q6DKK2 380 aaPredicted RBP7.77□□□□□ -1.17
UPF2-203ENST00000397053 SEPT12Q8IYM1 358 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 RMDN2Q96LZ7 410 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 RUNDC3BQ96NL0 473 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 ZBTB18Q99592 522 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 ZNF341Q9BYN7 854 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 PALD1Q9ULE6 856 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 PRXQ9BXM0 1461 aa7.77□□□□□ -1.17
UPF2-203ENST00000397053 PHKG2P15735 406 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms