RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 SPC24Q8NBT2 197 aa16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 IL31RAQ8NI17 732 aa16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 FGD4Q96M96 766 aa16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 IWS1Q96ST2 819 aa16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 SAGE1Q9NXZ1 904 aa16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 SOWAHBA6NEL2 793 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 SLC15A5A6NIM6 579 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 LAD1O00515 517 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 SPTLC2O15270 562 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 NEMFO60524 1076 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 ADORA2AP29274 412 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 PTGDRQ13258 359 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 Q4G0T1 1027 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 PLA2G4DQ86XP0 818 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 DDX25Q9UHL0 483 aaKnown RBP16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 PYCARDQ9ULZ3 195 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 IGLV3-22A0A075B6J6 115 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 A0A1W2PQ27 194 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 A0A1W2PQ64 194 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 A0A1W2PQD8 194 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 FAM86B1E9PN63 330 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 CTAGE5O15320 804 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 SLC37A4O43826 429 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 TRPA1O75762 1119 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 TBC1D8O95759 1140 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 PGK2P07205 417 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 NR3C2P08235 984 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 FAM86B2P0C5J1 330 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 EDNRBP24530 442 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 MRPS9P82933 396 aaKnown RBP16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 ZNF792Q3KQV3 632 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 MORN1Q5T089 497 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 VSIG10LQ86VR7 867 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 LENG9Q96B70 501 aa16.74■□□□□ 0.27
TM9SF1-202ENST00000396854 CASP8AP2Q9UKL3 1982 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 CCND2P30279 289 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 ZNF75DP51815 510 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 CEP55Q53EZ4 464 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 ARL6IP4Q66PJ3 421 aaKnown RBP16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 NIPA1Q7RTP0 329 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 POTEDQ86YR6 584 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 JMYQ8N9B5 988 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 TMEM60Q9H2L4 133 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 DIS3Q9Y2L1 958 aaKnown RBP16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 UBIAD1Q9Y5Z9 338 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 STAM2O75886 525 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 ZNF76P36508 570 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 PRPHP41219 470 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 ME1P48163 572 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 ZNF165P49910 485 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 SETQ01105 290 aaPredicted RBP16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 MXRA8Q9BRK3 442 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 PCDHA7Q9UN72 937 aa16.73■□□□□ 0.27
TM9SF1-202ENST00000396854 B4DLN1 442 aa16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 MEIS1O00470 390 aa16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 COBLO75128 1261 aa16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 OR52Z1P0C646 297 aa16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 LACTBP83111 547 aaPredicted RBP16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 ADALQ6DHV7 355 aa16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 ZNF467Q7Z7K2 595 aaPredicted RBP16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 MORC4Q8TE76 937 aa16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 MTMR9Q96QG7 549 aa16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 MPHOSPH6Q99547 160 aaKnown RBP16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 DNAJC25Q9H1X3 360 aa16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
TM9SF1-202ENST00000396854 TBX3O15119 743 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 PTGS1P23219 599 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 CTGFP29279 349 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 SP3Q02447 781 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 CALCRLQ16602 461 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 PRR16Q569H4 304 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 CYP2W1Q8TAV3 490 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 SOCS4Q8WXH5 440 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 USP6NLQ92738 828 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 FBXO2Q9UK22 296 aaPredicted RBP16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 SRPRBQ9Y5M8 271 aaKnown RBP16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 TNPO2O14787 897 aaKnown RBP16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 HOXC6P09630 235 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 MYCLP12524 364 aaPredicted RBP16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 ITGB5P18084 799 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 CDC25BP30305 580 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 FCGRTP55899 365 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 MAP2K1Q02750 393 aaPredicted RBP16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 ETNPPLQ8TBG4 499 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 INPP4AQ96PE3 977 aaPredicted RBP16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 JADE2Q9NQC1 790 aa16.71■□□□□ 0.27
TM9SF1-202ENST00000396854 MAP2K5Q13163 448 aa16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 SNW1Q13573 536 aaKnown RBP16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 STXBP2Q15833 593 aa16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 AXDND1Q5T1B0 1012 aaPredicted RBP16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 SARM1Q6SZW1 724 aa16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 CCDC73Q6ZRK6 1079 aa16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 DPP9Q86TI2 863 aa16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 KRI1Q8N9T8 703 aaKnown RBP16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 MRPS27Q92552 414 aaKnown RBP16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 NUDT12Q9BQG2 462 aa16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 TRIM5Q9C035 493 aa16.7■□□□□ 0.26
TM9SF1-202ENST00000396854 GOLPH3LQ9H4A5 285 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms