RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 TECTAO75443 2155 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 WDFY4Q6ZS81 3184 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 SNHG28P0DPA3 235 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 HOXD8P13378 290 aaPredicted RBP9.91□□□□□ -0.82
SCFD1-202ENST00000396629 HIC1Q14526 733 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 SMAD2Q15796 467 aaKnown RBP9.91□□□□□ -0.82
SCFD1-202ENST00000396629 KIAA0753Q2KHM9 967 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 CHST3Q7LGC8 479 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 RPAINQ86UA6 219 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 PRSS33Q8NF86 280 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 TBC1D5Q92609 795 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 TOP1MTQ969P6 601 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 TAAR1Q96RJ0 339 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 IWS1Q96ST2 819 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 CLDND1Q9NY35 253 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 KMT2EQ8IZD2 1858 aa9.91□□□□□ -0.82
SCFD1-202ENST00000396629 RSPH10B2B2RC85 870 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 MBTPS2O43462 519 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 RSPH10BP0C881 870 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 LAMC2Q13753 1193 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 ALX1Q15699 326 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 STXBP2Q15833 593 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 FBXO11Q86XK2 927 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 PPTC7Q8NI37 304 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 SYTL5Q8TDW5 730 aaPredicted RBP9.9□□□□□ -0.82
SCFD1-202ENST00000396629 NSUN6Q8TEA1 469 aaKnown RBP9.9□□□□□ -0.82
SCFD1-202ENST00000396629 POP1Q99575 1024 aaKnown RBP9.9□□□□□ -0.82
SCFD1-202ENST00000396629 DCTPP1Q9H773 170 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 COL20A1Q9P218 1284 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 TTC41PQ6P2S7 1318 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 ST18O60284 1047 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 HNRNPUQ00839 825 aaKnown RBP eCLIP9.9□□□□□ -0.82
SCFD1-202ENST00000396629 EP400NLQ6ZTU2 488 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 SERINC5Q86VE9 423 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 RNF135Q8IUD6 432 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 EDAQ92838 391 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 TTC14Q96N46 770 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 YME1L1Q96TA2 773 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 LMAN2LQ9H0V9 348 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 MUTYHQ9UIF7 546 aa9.9□□□□□ -0.82
SCFD1-202ENST00000396629 MYO7AQ13402 2215 aa9.9□□□□□ -0.83
SCFD1-202ENST00000396629 ZNF286BP0CG31 522 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 PTPN5P54829 565 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 USH1GQ495M9 461 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 PI4K2BQ8TCG2 481 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 SEPT8Q92599 483 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 FSD1Q9BTV5 496 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 ABCB11O95342 1321 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.89□□□□□ -0.83
SCFD1-202ENST00000396629 C5orf67F2Z3F1 127 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 PPFIA4O75335 1185 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 EIF3JO75822 258 aaKnown RBP9.89□□□□□ -0.83
SCFD1-202ENST00000396629 RB1P06400 928 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 HOXC8P31273 242 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 THPOP40225 353 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 DLX2Q07687 328 aaPredicted RBP9.89□□□□□ -0.83
SCFD1-202ENST00000396629 HYAL1Q12794 435 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 PKN1Q16512 942 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 VPS53Q5VIR6 699 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 DHX37Q8IY37 1157 aaKnown RBP9.89□□□□□ -0.83
SCFD1-202ENST00000396629 RMDN3Q96TC7 470 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 PRRX2Q99811 253 aa9.89□□□□□ -0.83
SCFD1-202ENST00000396629 UPP2O95045 317 aa9.88□□□□□ -0.83
SCFD1-202ENST00000396629 LINC00271P0C7V0 271 aa9.88□□□□□ -0.83
SCFD1-202ENST00000396629 SMAD4Q13485 552 aaKnown RBP9.88□□□□□ -0.83
SCFD1-202ENST00000396629 GPATCH4Q5T3I0 446 aaKnown RBP9.88□□□□□ -0.83
SCFD1-202ENST00000396629 IER5LQ5T953 404 aa9.88□□□□□ -0.83
SCFD1-202ENST00000396629 MCF2L2Q86YR7 1114 aa9.88□□□□□ -0.83
SCFD1-202ENST00000396629 OSBPL7Q9BZF2 842 aa9.88□□□□□ -0.83
SCFD1-202ENST00000396629 MRVI1Q9Y6F6 885 aa9.88□□□□□ -0.83
SCFD1-202ENST00000396629 TRIOO75962 3097 aa9.88□□□□□ -0.83
SCFD1-202ENST00000396629 TMEM221A6NGB7 291 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 M0R296 226 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 STXBP3O00186 592 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 CAND2O75155 1236 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 NR3C2P08235 984 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 TCF15Q12870 199 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 RRP12Q5JTH9 1297 aaKnown RBP9.87□□□□□ -0.83
SCFD1-202ENST00000396629 ARHGEF16Q5VV41 709 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 TRIM67Q6ZTA4 783 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 C16orf70Q9BSU1 422 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 TOMM22Q9NS69 142 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 KIAA1671Q9BY89 1806 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 C17orf102A2RUQ5 167 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 GRM6O15303 877 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 BMPR1AP36894 532 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 CLUL1Q15846 466 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 CDC37Q16543 378 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-202ENST00000396629 CELF3Q5SZQ8 465 aaKnown RBP9.87□□□□□ -0.83
SCFD1-202ENST00000396629 KCNV1Q6PIU1 500 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 FIBCD1Q8N539 461 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 APBB2Q92870 758 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 ATP6V0A1Q93050 837 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 IL17RAQ96F46 866 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 UBA5Q9GZZ9 404 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 CPVLQ9H3G5 476 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 PXMP2Q9NR77 195 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 CD207Q9UJ71 328 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 RWDD3Q9Y3V2 267 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms