RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PDHBP11177 359 aa19.98■□□□□ 0.79
TNFSF13-205ENST00000396545 BAATQ14032 418 aaPredicted RBP19.98■□□□□ 0.79
TNFSF13-205ENST00000396545 ATL3Q6DD88 541 aa19.98■□□□□ 0.79
TNFSF13-205ENST00000396545 FANCBQ8NB91 859 aa19.98■□□□□ 0.79
TNFSF13-205ENST00000396545 GPCPD1Q9NPB8 672 aa19.98■□□□□ 0.79
TNFSF13-205ENST00000396545 FAM217BQ9NTX9 383 aaPredicted RBP19.98■□□□□ 0.79
TNFSF13-205ENST00000396545 LOC102724159A0A0B4J2E5 919 aa19.97■□□□□ 0.79
TNFSF13-205ENST00000396545 FOSL2P15408 326 aa19.97■□□□□ 0.79
TNFSF13-205ENST00000396545 ADD1P35611 737 aaKnown RBP19.97■□□□□ 0.79
TNFSF13-205ENST00000396545 ALDH5A1P51649 535 aaPredicted RBP19.97■□□□□ 0.79
TNFSF13-205ENST00000396545 ITGA7Q13683 1181 aa19.97■□□□□ 0.79
TNFSF13-205ENST00000396545 PWP2Q15269 919 aaKnown RBP19.97■□□□□ 0.79
TNFSF13-205ENST00000396545 RAB11FIP4Q86YS3 637 aa19.97■□□□□ 0.79
TNFSF13-205ENST00000396545 ADD3Q9UEY8 706 aaKnown RBP19.97■□□□□ 0.79
TNFSF13-205ENST00000396545 TTC28Q96AY4 2481 aa19.97■□□□□ 0.79
TNFSF13-205ENST00000396545 STK36Q9NRP7 1315 aa19.97■□□□□ 0.79
TNFSF13-205ENST00000396545 ZEB2O60315 1214 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 SNHG28P0DPA3 235 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 IFNAR1P17181 557 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 CDC27P30260 824 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 CYP2C18P33260 490 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 ZNF543Q08ER8 600 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 GRIN2CQ14957 1233 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 NTRK3Q16288 839 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 DUSP28Q4G0W2 176 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 CCDC183Q5T5S1 534 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 PSRC1Q6PGN9 363 aaPredicted RBP19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 LEO1Q8WVC0 666 aaPredicted RBP19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 CLEC4DQ8WXI8 215 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 SEZ6LQ9BYH1 1024 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 KAT14Q9H8E8 782 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 CHD7Q9P2D1 2997 aa19.96■□□□□ 0.79
TNFSF13-205ENST00000396545 SYCE3A1L190 88 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 ACRP10323 421 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 TROAPQ12815 778 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 FBXO18Q8NFZ0 1043 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 WASF1Q92558 559 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 C8orf76Q96K31 380 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 HIPK3Q9H422 1215 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 CFAP45Q9UL16 551 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 PNMA2Q9UL42 364 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 KIF5BP33176 963 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 SLC30A10Q6XR72 485 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 ZNF365Q70YC5 407 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 TRIM22Q8IYM9 498 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 TIFAQ96CG3 184 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 SPATA32Q96LK8 384 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 ZNF576Q9H609 170 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 IL23AQ9NPF7 189 aa19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 TFIP11Q9UBB9 837 aaKnown RBP19.95■□□□□ 0.78
TNFSF13-205ENST00000396545 UMODL1Q5DID0 1318 aa19.94■□□□□ 0.78
TNFSF13-205ENST00000396545 LETM1O95202 739 aaPredicted RBP19.94■□□□□ 0.78
TNFSF13-205ENST00000396545 GNAQP50148 359 aa19.94■□□□□ 0.78
TNFSF13-205ENST00000396545 PSMC6P62333 389 aa19.94■□□□□ 0.78
TNFSF13-205ENST00000396545 CTCFLQ8NI51 663 aaPredicted RBP19.94■□□□□ 0.78
TNFSF13-205ENST00000396545 NOC4LQ9BVI4 516 aaKnown RBP19.94■□□□□ 0.78
TNFSF13-205ENST00000396545 PBX4Q9BYU1 374 aa19.94■□□□□ 0.78
TNFSF13-205ENST00000396545 PANK2Q9BZ23 570 aa19.94■□□□□ 0.78
TNFSF13-205ENST00000396545 TRPV6Q9H1D0 765 aa19.94■□□□□ 0.78
TNFSF13-205ENST00000396545 RBM47A0AV96 593 aaKnown RBP19.93■□□□□ 0.78
TNFSF13-205ENST00000396545 B4GALT4O60513 344 aa19.93■□□□□ 0.78
TNFSF13-205ENST00000396545 PPFIA3O75145 1194 aa19.93■□□□□ 0.78
TNFSF13-205ENST00000396545 FOSBP53539 338 aa19.93■□□□□ 0.78
TNFSF13-205ENST00000396545 SSRP1Q08945 709 aaKnown RBP19.93■□□□□ 0.78
TNFSF13-205ENST00000396545 RNF207Q6ZRF8 634 aa19.93■□□□□ 0.78
TNFSF13-205ENST00000396545 HERVK_113Q902F9 699 aa19.93■□□□□ 0.78
TNFSF13-205ENST00000396545 WDR11Q9BZH6 1224 aa19.93■□□□□ 0.78
TNFSF13-205ENST00000396545 GRXCR1A8MXD5 290 aa19.92■□□□□ 0.78
TNFSF13-205ENST00000396545 RXRAP19793 462 aa19.92■□□□□ 0.78
TNFSF13-205ENST00000396545 CALML3P27482 149 aa19.92■□□□□ 0.78
TNFSF13-205ENST00000396545 PBX2P40425 430 aa19.92■□□□□ 0.78
TNFSF13-205ENST00000396545 RPS6P62753 249 aaKnown RBP19.92■□□□□ 0.78
TNFSF13-205ENST00000396545 GUCY1B3Q02153 619 aa19.92■□□□□ 0.78
TNFSF13-205ENST00000396545 PNMA1Q8ND90 353 aa19.92■□□□□ 0.78
TNFSF13-205ENST00000396545 MYL10Q9BUA6 226 aa19.92■□□□□ 0.78
TNFSF13-205ENST00000396545 RCOR1Q9UKL0 485 aa19.92■□□□□ 0.78
TNFSF13-205ENST00000396545 EDNRBP24530 442 aa19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 ZNF396Q96N95 335 aaPredicted RBP19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 RNF26Q9BY78 433 aaPredicted RBP19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 WNT8AQ9H1J5 351 aa19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 RBSNQ9H1K0 784 aa19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 CXXC1Q9P0U4 656 aaPredicted RBP19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 PURAQ00577 322 aaKnown RBP19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 GPATCH4Q5T3I0 446 aaKnown RBP19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 BRAPQ7Z569 592 aa19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 LZTS2Q9BRK4 669 aa19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 ALG1Q9BT22 464 aa19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 POLR3EQ9NVU0 708 aa19.91■□□□□ 0.78
TNFSF13-205ENST00000396545 MUC3AQ02505 3323 aa19.9■□□□□ 0.78
TNFSF13-205ENST00000396545 DEXIO95424 95 aa19.9■□□□□ 0.78
TNFSF13-205ENST00000396545 CPT1AP50416 773 aa19.9■□□□□ 0.78
TNFSF13-205ENST00000396545 CCL23P55773 120 aa19.9■□□□□ 0.78
TNFSF13-205ENST00000396545 AKAP17AQ02040 695 aaKnown RBP19.9■□□□□ 0.78
TNFSF13-205ENST00000396545 DNERQ8NFT8 737 aa19.9■□□□□ 0.78
TNFSF13-205ENST00000396545 PGBD1Q96JS3 809 aa19.9■□□□□ 0.78
TNFSF13-205ENST00000396545 FGBP02675 491 aa19.89■□□□□ 0.77
TNFSF13-205ENST00000396545 GOLGA8HP0CJ92 632 aa19.89■□□□□ 0.77
TNFSF13-205ENST00000396545 NASPP49321 788 aaPredicted RBP19.89■□□□□ 0.77
TNFSF13-205ENST00000396545 PDE4DQ08499 809 aa19.89■□□□□ 0.77
TNFSF13-205ENST00000396545 GRM4Q14833 912 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms